RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PAQR3Q6TCH7 311 aa6.43□□□□□ -1.38
LINC00560-201ENST00000564593 RBM12BQ8IXT5 1001 aaKnown RBP6.43□□□□□ -1.38
LINC00560-201ENST00000564593 FLAD1Q8NFF5 587 aa6.43□□□□□ -1.38
LINC00560-201ENST00000564593 PEX11GQ96HA9 241 aa6.43□□□□□ -1.38
LINC00560-201ENST00000564593 KIRREL1Q96J84 757 aa6.43□□□□□ -1.38
LINC00560-201ENST00000564593 EMC7Q9NPA0 242 aa6.43□□□□□ -1.38
LINC00560-201ENST00000564593 H2AFY2Q9P0M6 372 aaPredicted RBP6.43□□□□□ -1.38
LINC00560-201ENST00000564593 MYOTQ9UBF9 498 aa6.43□□□□□ -1.38
LINC00560-201ENST00000564593 DBR1Q9UK59 544 aaKnown RBP6.43□□□□□ -1.38
LINC00560-201ENST00000564593 WASHC2CQ9Y4E1 1318 aa6.43□□□□□ -1.38
LINC00560-201ENST00000564593 F8W031 263 aaPredicted RBP6.42□□□□□ -1.38
LINC00560-201ENST00000564593 SCDO00767 359 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 SGSM2O43147 1006 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 HIP1RO75146 1068 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 KATNA1O75449 491 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 MPOP05164 745 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 ERVFRD-1P60508 538 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 FIGNQ5HY92 759 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 FYB2Q5VWT5 728 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 CYP4F22Q6NT55 531 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 KCTD1Q719H9 257 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 MILR1Q7Z6M3 343 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 PHOSPHO1Q8TCT1 267 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 IRF2BPLQ9H1B7 796 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 METTL14Q9HCE5 456 aaKnown RBP6.42□□□□□ -1.38
LINC00560-201ENST00000564593 PALD1Q9ULE6 856 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 PCDHB4Q9Y5E5 795 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 ATP23Q9Y6H3 246 aa6.42□□□□□ -1.38
LINC00560-201ENST00000564593 NUDT19A8MXV4 375 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 S100BP04271 92 aaPredicted RBP6.41□□□□□ -1.38
LINC00560-201ENST00000564593 ADGRF1Q5T601 910 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 CPZQ66K79 652 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 CREB3L3Q68CJ9 461 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 IQSEC1Q6DN90 963 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 NOSTRINQ8IVI9 506 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 TRIM48Q8IWZ4 208 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 EFHBQ8N7U6 833 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 PCIF1Q9H4Z3 704 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 ASH2LQ9UBL3 628 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 ZNF652Q9Y2D9 606 aa6.41□□□□□ -1.38
LINC00560-201ENST00000564593 CLASP2O75122 1294 aaKnown RBP6.4□□□□□ -1.38
LINC00560-201ENST00000564593 LTFP02788 710 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 KIF11P52732 1056 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 EPHA5P54756 1037 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 ITKQ08881 620 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 TUSC3Q13454 348 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 NR1I3Q14994 352 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 RAB3GAP1Q15042 981 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 FSTL4Q6MZW2 842 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 SPOCD1Q6ZMY3 1216 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.4□□□□□ -1.38
LINC00560-201ENST00000564593 PASD1Q8IV76 773 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 KIAA1958Q8N8K9 716 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 COG1Q8WTW3 980 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 INTS4Q96HW7 963 aaKnown RBP6.4□□□□□ -1.38
LINC00560-201ENST00000564593 SCYL1Q96KG9 808 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 PUS7LQ9H0K6 701 aaKnown RBP6.4□□□□□ -1.38
LINC00560-201ENST00000564593 KLHL42Q9P2K6 505 aa6.4□□□□□ -1.38
LINC00560-201ENST00000564593 TCRBV5S2A0A599 114 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 DBX1A6NMT0 343 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 ULK1O75385 1050 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 ZBTB7AO95365 584 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 SLC9A1P19634 815 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 MTMR1Q13613 665 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 BTBD8Q5XKL5 378 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 HDGFL2Q7Z4V5 671 aaPredicted RBP6.4□□□□□ -1.39
LINC00560-201ENST00000564593 ATG4DQ86TL0 474 aaPredicted RBP6.4□□□□□ -1.39
LINC00560-201ENST00000564593 CLEC4DQ8WXI8 215 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 SLC6A17Q9H1V8 727 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 RIC8BQ9NVN3 520 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 TELO2Q9Y4R8 837 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 SPO11Q9Y5K1 396 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 B3GALT1Q9Y5Z6 326 aa6.4□□□□□ -1.39
LINC00560-201ENST00000564593 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.39□□□□□ -1.39
LINC00560-201ENST00000564593 DVL2O14641 736 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 PTPN1P18031 435 aaKnown RBP6.39□□□□□ -1.39
LINC00560-201ENST00000564593 GJA4P35212 333 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 PDE6BP35913 854 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 TMEM132BQ14DG7 1078 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 SEC23AQ15436 765 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 DDB1Q16531 1140 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 RPTNQ6XPR3 784 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 CNTD1Q8N815 330 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 DLG3Q92796 817 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 SLC5A5Q92911 643 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 MTMR8Q96EF0 704 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 ELF4Q99607 663 aaPredicted RBP6.39□□□□□ -1.39
LINC00560-201ENST00000564593 KCNH7Q9NS40 1196 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 TOMM22Q9NS69 142 aa6.39□□□□□ -1.39
LINC00560-201ENST00000564593 G3BP2Q9UN86 482 aaKnown RBP6.39□□□□□ -1.39
LINC00560-201ENST00000564593 OR14I1A6ND48 311 aa6.38□□□□□ -1.39
LINC00560-201ENST00000564593 FAM90A27PA6NNH2 459 aa6.38□□□□□ -1.39
LINC00560-201ENST00000564593 TGM5O43548 720 aa6.38□□□□□ -1.39
LINC00560-201ENST00000564593 BUB1BO60566 1050 aaPredicted RBP6.38□□□□□ -1.39
LINC00560-201ENST00000564593 PRR5P85299 388 aa6.38□□□□□ -1.39
LINC00560-201ENST00000564593 GRIN1Q05586 938 aa6.38□□□□□ -1.39
LINC00560-201ENST00000564593 TMEM62Q0P6H9 643 aa6.38□□□□□ -1.39
LINC00560-201ENST00000564593 FAPQ12884 760 aa6.38□□□□□ -1.39
LINC00560-201ENST00000564593 SLC9A5Q14940 896 aa6.38□□□□□ -1.39
LINC00560-201ENST00000564593 ODR4Q5SWX8 454 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms