RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 STAMBPO95630 424 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 SOX9P48436 509 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 INHBEP58166 350 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 ZNF280AP59817 542 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 AKAP17AQ02040 695 aaKnown RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 APOBRQ0VD83 1088 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 MAP7Q14244 749 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 CLUL1Q15846 466 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 SLC14A2Q15849 920 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 PKN1Q16512 942 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 KIF4BQ2VIQ3 1234 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 PRR16Q569H4 304 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 RRP12Q5JTH9 1297 aaKnown RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 HP1BP3Q5SSJ5 553 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 CXorf57Q6NSI4 855 aaKnown RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 C1orf122Q6ZSJ8 110 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 CBLL1Q75N03 491 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 CDC37L1Q7L3B6 337 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 CCDC91Q7Z6B0 441 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 TRIM74Q86UV6 250 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 TRIM73Q86UV7 250 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 PEX5LQ8IYB4 626 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 KRT222Q8N1A0 295 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 AFAP1Q8N556 730 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 TMEM102Q8N9M5 508 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 PARD3BQ8TEW8 1205 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 THAP3Q8WTV1 239 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 JAKMIP2Q96AA8 810 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 TIFAQ96CG3 184 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 HOOK2Q96ED9 719 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 ZMAT2Q96NC0 199 aaKnown RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 NELL2Q99435 816 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 DNAI2Q9GZS0 605 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 KCNQ5Q9NR82 932 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 SMYD2Q9NRG4 433 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 TCP11L1Q9NUJ3 509 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 OBP2AQ9NY56 170 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 PSD3Q9NYI0 1048 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 POGKQ9P215 609 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 ITGB1BP2Q9UKP3 347 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 ZHX1Q9UKY1 873 aaPredicted RBP5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 MTUS1Q9ULD2 1270 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 SOX13Q9UN79 622 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 TRIM17Q9Y577 477 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 ANGPTL3Q9Y5C1 460 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 PTCH2Q9Y6C5 1203 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 SNCAIPQ9Y6H5 919 aa5.07□□□□□ -1.6
HMGB3P26-201ENST00000560051 RNF123Q5XPI4 1314 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 SCRIBQ14160 1630 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 A0A0B4J203 849 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 KIF2AO00139 706 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 SOX1O00570 391 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 SLC27A2O14975 620 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 KINO60870 393 aaKnown RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ECEL1O95672 775 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 GLULP15104 373 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ZSCAN20P17040 1043 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 GUCY2CP25092 1073 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 HOXD12P35452 270 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 MXI1P50539 228 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 EVCP57679 992 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 GJA9P57773 515 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ITKQ08881 620 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 NSUN2Q08J23 767 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ACAP1Q15027 740 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ARHGEF6Q15052 776 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 POSTNQ15063 836 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 DDR2Q16832 855 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 PREPLQ4J6C6 727 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 BOLA3Q53S33 107 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 CCDC178Q5BJE1 867 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 HECTD3Q5T447 861 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 FIP1L1Q6UN15 594 aaKnown RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 XKR5Q6UX68 686 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ANGPTL8Q6UXH0 198 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 EP400NLQ6ZTU2 488 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ZAR1Q86SH2 424 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 RNF180Q86T96 592 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 SRLQ86TD4 932 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 NLRP14Q86W24 1093 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 SLC44A2Q8IWA5 706 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 EFCAB13Q8IY85 973 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 RTKN2Q8IZC4 609 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 TAB3Q8N5C8 712 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 LSMEM1Q8N8F7 131 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 C1orf127Q8N9H9 656 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 SPATA5Q8NB90 893 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 UHMK1Q8TAS1 419 aaKnown RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ASAP3Q8TDY4 903 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 ZNF606Q8WXB4 792 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 TTC17Q96AE7 1141 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 HVCN1Q96D96 273 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 MFSD3Q96ES6 412 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 CDCA5Q96FF9 252 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 EAF1Q96JC9 268 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 CLMNQ96JQ2 1002 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 CNDP2Q96KP4 475 aaKnown RBP5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 TIGD1Q96MW7 591 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 OSMRQ99650 979 aa5.06□□□□□ -1.6
HMGB3P26-201ENST00000560051 SMAD5Q99717 465 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms