RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 FAM173BQ6P4H8 233 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 SMAP1Q8IYB5 467 aaPredicted RBP15.97■□□□□ 0.15
SNX6-206ENST00000556162 MTG1Q9BT17 334 aaPredicted RBP15.97■□□□□ 0.15
SNX6-206ENST00000556162 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 C11orf49Q9H6J7 331 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 SAMM50Q9Y512 469 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 ELP1O95163 1332 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 FRMPD3Q5JV73 1810 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 MKI67P46013 3256 aaKnown RBP15.97■□□□□ 0.15
SNX6-206ENST00000556162 A0A1W2PQ45 241 aaPredicted RBP15.97■□□□□ 0.15
SNX6-206ENST00000556162 A0A1W2PQY0 241 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 BRD1O95696 1058 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 OR52Z1P0C646 297 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 UTP14CQ5TAP6 766 aaKnown RBP15.97■□□□□ 0.15
SNX6-206ENST00000556162 STARD7Q9NQZ5 370 aa15.97■□□□□ 0.15
SNX6-206ENST00000556162 WDR64B1ANS9 1081 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 LAD1O00515 517 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 CHMP2AO43633 222 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 ATG7O95352 703 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 COL6A1P12109 1028 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 SFNP31947 248 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 MIS18BP1Q6P0N0 1132 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 C4orf32Q8N8J7 132 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 UNC45AQ9H3U1 944 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 AZI2Q9H6S1 392 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 TTC12Q9H892 705 aaPredicted RBP15.96■□□□□ 0.15
SNX6-206ENST00000556162 CEP131Q9UPN4 1083 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 PCDHA10Q9Y5I2 948 aa15.96■□□□□ 0.15
SNX6-206ENST00000556162 BMP15O95972 392 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 LGALS2P05162 132 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 JAK3P52333 1124 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 NUCB2P80303 420 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 PPP2R5CQ13362 524 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 ABHD15Q6UXT9 468 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 MIER3Q7Z3K6 550 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 UBE2Q1Q7Z7E8 422 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 GLG1Q92896 1179 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 DISC1Q9NRI5 854 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 DNAH12Q6ZR08 3092 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 BACH1O14867 736 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 PSAPP07602 524 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 ZNF286BP0CG31 522 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 CHMP4BP1P59074 171 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 SF3A1Q15459 793 aaKnown RBP15.95■□□□□ 0.14
SNX6-206ENST00000556162 B3GNT9Q6UX72 402 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 RDM1Q8NG50 284 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 ZNF396Q96N95 335 aaPredicted RBP15.95■□□□□ 0.14
SNX6-206ENST00000556162 C16orf70Q9BSU1 422 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 KATNAL1Q9BW62 490 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 SMARCAD1Q9H4L7 1026 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 VAV3Q9UKW4 847 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 ZNF215Q9UL58 517 aaPredicted RBP15.95■□□□□ 0.14
SNX6-206ENST00000556162 ZDHHC9Q9Y397 364 aa15.95■□□□□ 0.14
SNX6-206ENST00000556162 DOCK5Q9H7D0 1870 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 H3BRB1 525 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 CAPN15O75808 1086 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 F2P00734 622 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 SUPT20HL2P0C7V6 817 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 DDIT3P35638 169 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 STAT5BP51692 787 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 ATP2C1P98194 919 aaPredicted RBP15.94■□□□□ 0.14
SNX6-206ENST00000556162 TMEM266Q2M3C6 531 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 SWSAP1Q6NVH7 229 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 KAT2BQ92831 832 aa15.94■□□□□ 0.14
SNX6-206ENST00000556162 TUT1Q9H6E5 874 aaKnown RBP15.94■□□□□ 0.14
SNX6-206ENST00000556162 LGR5O75473 907 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 PRPHP41219 470 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 TECP42680 631 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 ATN1P54259 1190 aaPredicted RBP15.93■□□□□ 0.14
SNX6-206ENST00000556162 PSMC6P62333 389 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 CEBPZQ03701 1054 aaKnown RBP15.93■□□□□ 0.14
SNX6-206ENST00000556162 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 FOXD4L6Q3SYB3 417 aaPredicted RBP15.93■□□□□ 0.14
SNX6-206ENST00000556162 FAM160B1Q5W0V3 765 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 NCAPH2Q6IBW4 605 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 FOXD4L3Q6VB84 417 aaPredicted RBP15.93■□□□□ 0.14
SNX6-206ENST00000556162 DTHD1Q6ZMT9 781 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 PLPPR4Q7Z2D5 763 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 IPO9Q96P70 1041 aaKnown RBP15.93■□□□□ 0.14
SNX6-206ENST00000556162 ATP6V1DQ9Y5K8 247 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 CLIC4Q9Y696 253 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 EMSYQ7Z589 1322 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 IGKV6D-21A0A0A0MT36 114 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 A0A0U1RQG5 324 aaPredicted RBP15.93■□□□□ 0.14
SNX6-206ENST00000556162 PSEN2P49810 448 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 SPIRE1Q08AE8 756 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 MFSD10Q14728 455 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 KIAA0753Q2KHM9 967 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 SLC39A5Q6ZMH5 540 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 TRIM50Q86XT4 487 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 USP28Q96RU2 1077 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 PCYT2Q99447 389 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 SEZ6LQ9BYH1 1024 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 ZNF302Q9NR11 478 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 ERAP1Q9NZ08 941 aa15.93■□□□□ 0.14
SNX6-206ENST00000556162 EML1O00423 815 aa15.92■□□□□ 0.14
SNX6-206ENST00000556162 EPHA7Q15375 998 aa15.92■□□□□ 0.14
SNX6-206ENST00000556162 NBPF20Q3BBV1 942 aa15.92■□□□□ 0.14
SNX6-206ENST00000556162 ARL6IP4Q66PJ3 421 aaKnown RBP15.92■□□□□ 0.14
SNX6-206ENST00000556162 ATL3Q6DD88 541 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms