RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 WDR64B1ANS9 1081 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 ERVV-1B6SEH8 477 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 J3QW42 95 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PI15O43692 258 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 FOXD2O60548 495 aaPredicted RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PRNPP04156 253 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 SP9P0CG40 484 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 FOSL1P15407 271 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 GPTP24298 496 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 WEE1P30291 646 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 LTBRP36941 435 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP11P51784 963 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 ERVK-21P61565 698 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 ATP2B2Q01814 1243 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 MTMR3Q13615 1198 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 CCL14Q16627 93 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 SWI5Q1ZZU3 235 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 DUSP27Q5VZP5 1158 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 TTLL5Q6EMB2 1281 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PDE12Q6L8Q7 609 aaKnown RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 GADL1Q6ZQY3 521 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 RNF180Q86T96 592 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 RPAINQ86UA6 219 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PROSER1Q86XN7 944 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 ARMC10Q8N2F6 343 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 NUP133Q8WUM0 1156 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 HNRNPLLQ8WVV9 542 aaKnown RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 GLMNQ92990 594 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 EDC3Q96F86 508 aaKnown RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 LIN37Q96GY3 246 aaPredicted RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 CALR3Q96L12 384 aaKnown RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PRMT6Q96LA8 375 aaPredicted RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 TEPSINQ96N21 525 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 TGS1Q96RS0 853 aaKnown RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 UTP14AQ9BVJ6 771 aaKnown RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PHF7Q9BWX1 381 aaPredicted RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PPP1R12CQ9BZL4 782 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 ADAM19Q9H013 955 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 SMOC2Q9H3U7 446 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 LGR6Q9HBX8 967 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 ABI2Q9NYB9 513 aaPredicted RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 PODXL2Q9NZ53 605 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 TFIP11Q9UBB9 837 aaKnown RBP2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 GMEB2Q9UKD1 530 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 TRIM33Q9UPN9 1127 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 LRRC37AA6NMS7 1700 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 NBEAL1Q6ZS30 2694 aa2.93□□□□□ -1.94
TRAV1-1-201ENST00000542354 MTORP42345 2549 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 PRR19A6NJB7 356 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 CAPN9O14815 690 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 TLR3O15455 904 aaKnown RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 RNMTO43148 476 aaKnown RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 CYP26A1O43174 497 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 TBC1D4O60343 1298 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 KCNK5O95279 499 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 NTSR2O95665 410 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 EYA4O95677 639 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 PFKMP08237 780 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 ACTN1P12814 892 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 ELAVL4P26378 380 aaKnown RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 MAP4P27816 1152 aaKnown RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 MAPK4P31152 587 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 CYP2C18P33260 490 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 PIP4K2AP48426 406 aaPredicted RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 CSRP3P50461 194 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 RBM5P52756 815 aaKnown RBP eCLIP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 JAG1P78504 1218 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 PTK7Q13308 1070 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 CFAP100Q494V2 611 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 PARP10Q53GL7 1025 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 TCEAL5Q5H9L2 206 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 LCE1DQ5T752 114 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 DCAF15Q66K64 600 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 C16orf46Q6P387 395 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 HERC6Q8IVU3 1022 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 KREMEN2Q8NCW0 462 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 ATRIPQ8WXE1 791 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 RIN2Q8WYP3 895 aaPredicted RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 USP6NLQ92738 828 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 MISP3Q96FF7 219 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 UCN2Q96RP3 112 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 APBA2Q99767 749 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 SCNM1Q9BWG6 230 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 LACRTQ9GZZ8 138 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 NSUN3Q9H649 340 aaKnown RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 PARD6AQ9NPB6 346 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 STARD7Q9NQZ5 370 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 MTUS1Q9ULD2 1270 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 SORCS3Q9UPU3 1222 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 LAMA5O15230 3695 aa2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 FN1P02751 2386 aaKnown RBP2.92□□□□□ -1.94
TRAV1-1-201ENST00000542354 AK9Q5TCS8 1911 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 OTOFQ9HC10 1997 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 NF1P21359 2839 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 A0A0G2JLL6 359 aaPredicted RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 FAM95CA0A1B0GW59 222 aa2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 A0A1W2PQ45 241 aaPredicted RBP2.91□□□□□ -1.94
TRAV1-1-201ENST00000542354 A0A1W2PQY0 241 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms