RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 DDX3XO00571 662 aaKnown RBP eCLIP6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 ZNF28P17035 718 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 GPR85P60893 370 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 NFKB2Q00653 900 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 HABP4Q5JVS0 413 aaKnown RBP6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 MCTP2Q6DN12 878 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 OTOP3Q7RTS5 596 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 IFNL3Q8IZI9 196 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 PIP4K2CQ8TBX8 421 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 CLEC4DQ8WXI8 215 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 RBM15Q96T37 977 aaKnown RBP eCLIP6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 SPATA9Q9BWV2 254 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 CCDC113Q9H0I3 377 aa6.36□□□□□ -1.39
SOX9-AS1-214ENST00000540802 UACAQ9BZF9 1416 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 MROH6A6NGR9 719 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 C9orf118A6NHY6 69 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 PDPK1O15530 556 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 ADCY3O60266 1144 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 ITGB3P05106 788 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 IFRD2Q12894 506 aaPredicted RBP6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 RASGRF1Q13972 1273 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 KIZQ2M2Z5 673 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 SPATS1Q496A3 300 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 NBPF6Q5VWK0 638 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 SPATC1Q76KD6 591 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 NBPF4Q96M43 638 aa6.35□□□□□ -1.39
SOX9-AS1-214ENST00000540802 ASXL2Q76L83 1435 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 BLACEA4D250 179 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 SLC27A2O14975 620 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 GRK2P25098 689 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 IL13P35225 146 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 GRK3P35626 688 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 PROSER1Q86XN7 944 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 LGI4Q8N135 537 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 UHMK1Q8TAS1 419 aaKnown RBP6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 CLIC6Q96NY7 704 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 TMEM209Q96SK2 561 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 ZCCHC11Q5TAX3 1644 aaKnown RBP6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 DIP2BQ9P265 1576 aa6.34□□□□□ -1.39
SOX9-AS1-214ENST00000540802 PLB1Q6P1J6 1458 aa6.34□□□□□ -1.4
SOX9-AS1-214ENST00000540802 RAPGEF6Q8TEU7 1601 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 GLI2P10070 1586 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 COL6A2P12110 1019 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 ATP2B1P20020 1258 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 MLLT6P55198 1093 aaPredicted RBP6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 SPIRE1Q08AE8 756 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 DPH6Q7L8W6 267 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 SCUBE1Q8IWY4 988 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 LCORQ96JN0 433 aaPredicted RBP6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 YTHDC1Q96MU7 727 aaKnown RBP6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 C8orf37Q96NL8 207 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 INVSQ9Y283 1065 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 ABCC10Q5T3U5 1492 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 ARHGAP35Q9NRY4 1499 aa6.33□□□□□ -1.4
SOX9-AS1-214ENST00000540802 K7ESM1 405 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 U2SURPO15042 1029 aaKnown RBP6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 NKRFO15226 690 aaKnown RBP eCLIP6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 CYP7B1O75881 506 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 SOD2P04179 222 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 ADRB1P08588 477 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 EPHA5P54756 1037 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 TUSC3Q13454 348 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 TBC1D10BQ4KMP7 808 aaPredicted RBP6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 PRAMEF18Q5VWM3 479 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 FAM124AQ86V42 546 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 RBM12BQ8IXT5 1001 aaKnown RBP6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 ZBTB38Q8NAP3 1195 aaPredicted RBP6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 MBD6Q96DN6 1003 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 ZSWIM3Q96MP5 696 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 WRNIP1Q96S55 665 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 KCNJ15Q99712 375 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 TANGO6Q9C0B7 1094 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 SIRPGQ9P1W8 387 aa6.32□□□□□ -1.4
SOX9-AS1-214ENST00000540802 PPRC1Q5VV67 1664 aaKnown RBP6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 FAM47E-STBD1D6RA91 191 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 PLATP00750 562 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 FAHP16930 419 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 GRIN1Q05586 938 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 RBL2Q08999 1139 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 FOXB2Q5VYV0 432 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 BORAQ6PGQ7 559 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 HHIPL2Q6UWX4 724 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 TMC5Q6UXY8 1006 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 DTX3Q8N9I9 347 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 ZCCHC14Q8WYQ9 949 aaKnown RBP6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 IPPKQ9H8X2 491 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 RBPJLQ9UBG7 517 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
SOX9-AS1-214ENST00000540802 LRRIQ1Q96JM4 1722 aa6.3□□□□□ -1.4
SOX9-AS1-214ENST00000540802 NUP153P49790 1475 aaKnown RBP6.3□□□□□ -1.4
SOX9-AS1-214ENST00000540802 MAP3K4Q9Y6R4 1608 aa6.3□□□□□ -1.4
SOX9-AS1-214ENST00000540802 WNT9AO14904 365 aa6.3□□□□□ -1.4
SOX9-AS1-214ENST00000540802 B4GALT3O60512 393 aa6.3□□□□□ -1.4
SOX9-AS1-214ENST00000540802 GNAT1P11488 350 aa6.3□□□□□ -1.4
SOX9-AS1-214ENST00000540802 COL6A1P12109 1028 aa6.3□□□□□ -1.4
SOX9-AS1-214ENST00000540802 SSRP1Q08945 709 aaKnown RBP6.3□□□□□ -1.4
SOX9-AS1-214ENST00000540802 SERINC3Q13530 473 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms