RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 RNF40O75150 1001 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 EIF3JO75822 258 aaKnown RBP12.54□□□□□ -0.4
CCDC84-205ENST00000528088 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
CCDC84-205ENST00000528088 PTGS1P23219 599 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 EDNRBP24530 442 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 TNFAIP2Q03169 654 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 GNPTABQ3T906 1256 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 GALNT17Q6IS24 598 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 LAPTM4BQ86VI4 370 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 TEX2Q8IWB9 1127 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 SCFD2Q8WU76 684 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 KATNBL1Q9H079 304 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 SPC25Q9HBM1 224 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 PDGFCQ9NRA1 345 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 ATP11BQ9Y2G3 1177 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 MRVI1Q9Y6F6 885 aa12.54□□□□□ -0.4
CCDC84-205ENST00000528088 CCDC194A0A1B0GVG4 234 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.53□□□□□ -0.4
CCDC84-205ENST00000528088 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
CCDC84-205ENST00000528088 ADAMTS4O75173 837 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 GJB2P29033 226 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 BMP8BP34820 402 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 KRT2P35908 639 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 TRIM60Q495X7 471 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 FAM177A1Q8N128 213 aaPredicted RBP12.53□□□□□ -0.4
CCDC84-205ENST00000528088 KCTD17Q8N5Z5 321 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 MORC4Q8TE76 937 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 WDR11Q9BZH6 1224 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 PHF24Q9UPV7 400 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 DNAH12Q6ZR08 3092 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 LAMA3Q16787 3333 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 SYNRGQ9UMZ2 1314 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 DOCK5Q9H7D0 1870 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 H3BQV1 296 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 TXNP10599 105 aaKnown RBP12.53□□□□□ -0.4
CCDC84-205ENST00000528088 PBX2P40425 430 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 TMEM63BQ5T3F8 832 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 KRT40Q6A162 431 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 IQSEC1Q6DN90 963 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 SH3RF1Q7Z6J0 888 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 NLRX1Q86UT6 975 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 VSIG10LQ86VR7 867 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 KLHDC9Q8NEP7 349 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 LRCH3Q96II8 777 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 PHF20Q9BVI0 1012 aa12.53□□□□□ -0.4
CCDC84-205ENST00000528088 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 SORBS3O60504 671 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 STAM2O75886 525 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 C6orf222P0C671 652 aaPredicted RBP12.52□□□□□ -0.41
CCDC84-205ENST00000528088 SREBF1P36956 1147 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 ARHGAP4P98171 946 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 SNX17Q15036 470 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 NR6A1Q15406 480 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 CCSAPQ6IQ19 270 aaPredicted RBP12.52□□□□□ -0.41
CCDC84-205ENST00000528088 TAPT1Q6NXT6 567 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 XRRA1Q6P2D8 792 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 KRT25Q7Z3Z0 450 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 RNF180Q86T96 592 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 TLK2Q86UE8 772 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 DAGLBQ8NCG7 672 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 SNX21Q969T3 373 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 ALG2Q9H553 416 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 PKD2L1Q9P0L9 805 aa12.52□□□□□ -0.41
CCDC84-205ENST00000528088 A0A1W2PQ45 241 aaPredicted RBP12.51□□□□□ -0.41
CCDC84-205ENST00000528088 A0A1W2PQY0 241 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 CTAGE5O15320 804 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 DYNC1LI2O43237 492 aaPredicted RBP12.51□□□□□ -0.41
CCDC84-205ENST00000528088 DUSP11O75319 330 aaKnown RBP12.51□□□□□ -0.41
CCDC84-205ENST00000528088 MMP1P03956 469 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 SMPD1P17405 629 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
CCDC84-205ENST00000528088 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC84-205ENST00000528088 KCNA10Q16322 511 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 MCTP1Q6DN14 999 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 KCNV1Q6PIU1 500 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 PIK3AP1Q6ZUJ8 805 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
CCDC84-205ENST00000528088 PBXIP1Q96AQ6 731 aa12.51□□□□□ -0.41
CCDC84-205ENST00000528088 ZFRQ96KR1 1074 aaKnown RBP12.51□□□□□ -0.41
CCDC84-205ENST00000528088 UBE2OQ9C0C9 1292 aaKnown RBP12.51□□□□□ -0.41
CCDC84-205ENST00000528088 A0A1W2PPC1 479 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 NKRFO15226 690 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC84-205ENST00000528088 FIBPO43427 364 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 RFX1P22670 979 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 ITGB8P26012 769 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 TLE2Q04725 743 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 NR5A1Q13285 461 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 MTMR1Q13613 665 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 BECN1Q14457 450 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
CCDC84-205ENST00000528088 PUS10Q3MIT2 529 aaKnown RBP12.5□□□□□ -0.41
CCDC84-205ENST00000528088 DUSP28Q4G0W2 176 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms