RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 PAN2Q504Q3 1202 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 FSTL4Q6MZW2 842 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 RNF180Q86T96 592 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 C2orf69Q8N8R5 385 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 PCDH18Q9HCL0 1135 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 CABP5Q9NP86 173 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 B4GALT6Q9UBX8 382 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 IRAK3Q9Y616 596 aa8.46□□□□□ -1.06
UBE2D3-217ENST00000504211 TCAF2A6NFQ2 919 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 FAM90A27PA6NNH2 459 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 CYP2C8P10632 490 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 FAHP16930 419 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 YBX3P16989 372 aaKnown RBP eCLIP8.45□□□□□ -1.064e-8■□□□□ 8.6
UBE2D3-217ENST00000504211 CANXP27824 592 aaKnown RBP8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 STAT3P40763 770 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 NEK4P51957 841 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 GRIN1Q05586 938 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 PKN3Q6P5Z2 889 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 TMEFF1Q8IYR6 380 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 FAM26EQ8N5C1 309 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 SMARCC2Q8TAQ2 1214 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 BOCQ9BWV1 1114 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 SMG5Q9UPR3 1016 aaKnown RBP8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 FAN1Q9Y2M0 1017 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 B3GALT1Q9Y5Z6 326 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 SBNO2Q9Y2G9 1366 aa8.45□□□□□ -1.06
UBE2D3-217ENST00000504211 ACOT7O00154 380 aa8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 KCNK3O14649 394 aa8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 ZBTB48P10074 688 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 NKX3-2P78367 333 aa8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 FOXO4P98177 505 aa8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 PCBP1Q15365 356 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 SEPT7Q16181 437 aaKnown RBP8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 BTBD8Q5XKL5 378 aa8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 DLG3Q92796 817 aa8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 EPB41L4AQ9HCS5 686 aaPredicted RBP8.44□□□□□ -1.06
UBE2D3-217ENST00000504211 C8AP07357 584 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 HTRA3P83110 453 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 DSG1Q02413 1049 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 SSPNQ14714 243 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 SEC23AQ15436 765 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 PKN1Q16512 942 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 CD300LDQ6UXZ3 194 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 EP400NLQ6ZTU2 488 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 KRT26Q7Z3Y9 468 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 PROSER1Q86XN7 944 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 FAM129CQ86XR2 697 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 DDX11Q96FC9 970 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 KCNH7Q9NS40 1196 aa8.43□□□□□ -1.06
UBE2D3-217ENST00000504211 PTPDC1A2A3K4 754 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 F2P00734 622 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 C4BPAP04003 597 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 RAP1GAPP47736 663 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 LIMS1P48059 325 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 LINC00310P59036 64 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 IRF9Q00978 393 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 CAP1Q01518 475 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 CREB3L3Q68CJ9 461 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 ZNF662Q6ZS27 426 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 LINC00482Q8N8I6 264 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 CAAP1Q9H8G2 361 aa8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 CNOT6Q9ULM6 557 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBE2D3-217ENST00000504211 RFXAPO00287 272 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 SCDO00767 359 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 PLA2G1BP04054 148 aaKnown RBP8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 PI3P19957 117 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 SOX5P35711 763 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 HERVK_113P62684 666 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 CPZQ66K79 652 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 CILP2Q8IUL8 1156 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 FAM177A1Q8N128 213 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 CHAC2Q8WUX2 184 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 GORASP1Q9BQQ3 440 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 RIC8BQ9NVN3 520 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 KCTD3Q9Y597 815 aa8.41□□□□□ -1.06
UBE2D3-217ENST00000504211 HIP1RO75146 1068 aa8.4□□□□□ -1.06
UBE2D3-217ENST00000504211 SDHAP31040 664 aa8.4□□□□□ -1.06
UBE2D3-217ENST00000504211 ITGA1P56199 1179 aa8.4□□□□□ -1.06
UBE2D3-217ENST00000504211 DHCR24Q15392 516 aa8.4□□□□□ -1.06
UBE2D3-217ENST00000504211 KCNA10Q16322 511 aa8.4□□□□□ -1.06
UBE2D3-217ENST00000504211 CD276Q5ZPR3 534 aa8.4□□□□□ -1.06
UBE2D3-217ENST00000504211 NOX5Q96PH1 765 aa8.4□□□□□ -1.06
UBE2D3-217ENST00000504211 WASF3Q9UPY6 502 aa8.4□□□□□ -1.06
UBE2D3-217ENST00000504211 SHROOM4Q9ULL8 1493 aa8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 ZNF891A8MT65 544 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 DBPQ10586 325 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 SKOR2Q2VWA4 1001 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 RNF187Q5TA31 235 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 CC2D1AQ6P1N0 951 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 CNKSR3Q6P9H4 555 aa8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 LIPIQ6XZB0 460 aa8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 FNIP1Q8TF40 1166 aa8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 TMEM209Q96SK2 561 aa8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 SYT3Q9BQG1 590 aa8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 C11orf84Q9BUA3 381 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 SPC25Q9HBM1 224 aa8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 ZKSCAN5Q9Y2L8 839 aa8.39□□□□□ -1.07
UBE2D3-217ENST00000504211 PMF1-BGLAPU3KQ54 211 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms