RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 POTEGQ6S5H5 508 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 POTEEQ6S8J3 1075 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 CERS5Q8N5B7 392 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 SH3GL2Q99962 352 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 LRRC27Q9C0I9 530 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 BCAS3Q9H6U6 928 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 EPB41L5Q9HCM4 733 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
PTPN7-217ENST00000495688 EMILIN3Q9NT22 766 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 LRRC4BQ9NT99 713 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 SERPINB13Q9UIV8 391 aa14.34□□□□□ -0.11
PTPN7-217ENST00000495688 MED24O75448 989 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 CYP11B2P19099 503 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 SHMT1P34896 483 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 MRPL12P52815 198 aaKnown RBP14.33□□□□□ -0.12
PTPN7-217ENST00000495688 GUCY2DQ02846 1103 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 NAB2Q15742 525 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 SLC18A3Q16572 532 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 RNF10Q8N5U6 811 aaKnown RBP14.33□□□□□ -0.12
PTPN7-217ENST00000495688 ZIM3Q96PE6 472 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 KRT12Q99456 494 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 EDEM3Q9BZQ6 932 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 ARFGEF1Q9Y6D6 1849 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 MEIS1O00470 390 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 ZBTB5O15062 677 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 HEXIM1O94992 359 aaKnown RBP14.33□□□□□ -0.12
PTPN7-217ENST00000495688 CCT5P48643 541 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 GUCY2FP51841 1108 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 PSMC6P62333 389 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 KLHL30Q0D2K2 578 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 EMBQ6PCB8 327 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 SLF2Q8IX21 1173 aa14.33□□□□□ -0.12
PTPN7-217ENST00000495688 P2RX7Q99572 595 aaKnown RBP14.33□□□□□ -0.12
PTPN7-217ENST00000495688 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-217ENST00000495688 SLC9A1P19634 815 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 SNAP25P60880 206 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 KCNH2Q12809 1159 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 CCDC65Q8IXS2 484 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 CAPS2Q9BXY5 557 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 GRIN2DO15399 1336 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 SERPINB2P05120 415 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 KRT18P05783 430 aaKnown RBP14.32□□□□□ -0.12
PTPN7-217ENST00000495688 NFIAQ12857 509 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 ZFPM1Q8IX07 1006 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 PROCA1Q8NCQ7 364 aaPredicted RBP14.32□□□□□ -0.12
PTPN7-217ENST00000495688 TBC1D22AQ8WUA7 517 aa14.32□□□□□ -0.12
PTPN7-217ENST00000495688 GRID2IPA4D2P6 1211 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 NR2F2P24468 414 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 GNGT1P63211 74 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 PTK2Q05397 1052 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 VPS72Q15906 364 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 HYIQ5T013 277 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 SYN2Q92777 582 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-217ENST00000495688 CEP63Q96MT8 703 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 CCDC43Q96MW1 224 aaKnown RBP14.31□□□□□ -0.12
PTPN7-217ENST00000495688 NT5C3AQ9H0P0 336 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 GANQ9H2C0 597 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-217ENST00000495688 TAF1LQ8IZX4 1826 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 FAM170AA1A519 330 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 GYS1P13807 737 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 EPS15P42566 896 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 ATP1A2P50993 1020 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 CORO7P57737 925 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 QRICH1Q2TAL8 776 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 MEI1Q5TIA1 1274 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 CERKQ8TCT0 537 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 BCAS4Q8TDM0 211 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 CAVIN3Q969G5 261 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 INPP4AQ96PE3 977 aaPredicted RBP14.31□□□□□ -0.12
PTPN7-217ENST00000495688 RUFY1Q96T51 708 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 PCDHGC5Q9Y5F6 944 aa14.31□□□□□ -0.12
PTPN7-217ENST00000495688 HSF2BPO75031 334 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 CACNB3P54284 484 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 SLC12A3P55017 1021 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 PPARDQ03181 441 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 PABPC4Q13310 644 aaKnown RBP eCLIP14.3□□□□□ -0.122e-9■□□□□ 10.3
PTPN7-217ENST00000495688 SEPT2Q15019 361 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 PPP1R18Q6NYC8 613 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 FOXR2Q6PJQ5 311 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 CATSPER3Q86XQ3 398 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 KLHL7Q8IXQ5 586 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 RBM17Q96I25 401 aaKnown RBP14.3□□□□□ -0.12
PTPN7-217ENST00000495688 KCNMB3Q9NPA1 279 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 GDF3Q9NR23 364 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 PCDHA1Q9Y5I3 950 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 FOCADQ5VW36 1801 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 MYH4Q9Y623 1939 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 KDM3AQ9Y4C1 1321 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 ZNF233A6NK53 670 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 GOLGA8KD6RF30 607 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 HOXD13P35453 343 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 MARSP56192 900 aaKnown RBP14.3□□□□□ -0.12
PTPN7-217ENST00000495688 PDCLQ13371 301 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 ASIC2Q16515 512 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 PRR16Q569H4 304 aa14.3□□□□□ -0.12
PTPN7-217ENST00000495688 ZNF571Q7Z3V5 609 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms