RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 DLL1O00548 723 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 MAFGO15525 162 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 FOSP01100 380 aaPredicted RBP10.32□□□□□ -0.76
USF1-204ENST00000472217 RSPH10BP0C881 870 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 SCG2P13521 617 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 PSMA5P28066 241 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 KCNJ6P48051 423 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 CLK2P49760 499 aaKnown RBP10.32□□□□□ -0.76
USF1-204ENST00000472217 ADAM17P78536 824 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 DEFB103AP81534 67 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 ADGRE1Q14246 886 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 PFKFB3Q16875 520 aaPredicted RBP10.32□□□□□ -0.76
USF1-204ENST00000472217 TMCO2Q7Z6W1 182 aaPredicted RBP10.32□□□□□ -0.76
USF1-204ENST00000472217 TEX2Q8IWB9 1127 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 USP38Q8NB14 1042 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 CYP2W1Q8TAV3 490 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 LMBR1Q8WVP7 490 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 SEPT1Q8WYJ6 367 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 MXRA8Q9BRK3 442 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 JADE2Q9NQC1 790 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 KCNH7Q9NS40 1196 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 EMSYQ7Z589 1322 aa10.32□□□□□ -0.76
USF1-204ENST00000472217 EPB41L2O43491 1005 aaKnown RBP10.31□□□□□ -0.76
USF1-204ENST00000472217 PPFIA3O75145 1194 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 LGR5O75473 907 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 ARHGEF15O94989 841 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 CTSHP09668 335 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 GNAT1P11488 350 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 SREBF1P36956 1147 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 ARHGAP4P98171 946 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 NTRK3Q16288 839 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 PKN1Q16512 942 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 PHKBQ93100 1093 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 OSBPL7Q9BZF2 842 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 JPH1Q9HDC5 661 aaPredicted RBP10.31□□□□□ -0.76
USF1-204ENST00000472217 SLC9A2Q9UBY0 812 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 NRCAMQ92823 1304 aa10.31□□□□□ -0.76
USF1-204ENST00000472217 ABHD14A-ACY1A0A1B0GW23 586 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 ESYT2A0FGR8 921 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 ADAMTS3O15072 1205 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 PRPF3O43395 683 aaKnown RBP10.3□□□□□ -0.76
USF1-204ENST00000472217 TLL1O43897 1013 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 EFCAB14O75071 495 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 CAND2O75155 1236 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 ARP10275 920 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 IGFBP4P22692 258 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 MARK3P27448 753 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 PDIA3P30101 505 aaKnown RBP10.3□□□□□ -0.76
USF1-204ENST00000472217 TAP1Q03518 808 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 ITGB3BPQ13352 177 aaPredicted RBP10.3□□□□□ -0.76
USF1-204ENST00000472217 TOB2Q14106 344 aaPredicted RBP10.3□□□□□ -0.76
USF1-204ENST00000472217 IKBKEQ14164 716 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 CEP55Q53EZ4 464 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 JAKMIP3Q5VZ66 844 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 RUFY3Q7L099 469 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 SPRED2Q7Z698 418 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 DBF4BQ8NFT6 615 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 PPM1EQ8WY54 764 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 GLG1Q92896 1179 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 PCYT2Q99447 389 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 ZMYND12Q9H0C1 365 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 GLT8D2Q9H1C3 349 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 CERS4Q9HA82 394 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 NCOA5Q9HCD5 579 aaKnown RBP10.3□□□□□ -0.76
USF1-204ENST00000472217 ZSWIM6Q9HCJ5 1215 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 ERAP1Q9NZ08 941 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 COL4A4P53420 1690 aaPredicted RBP10.3□□□□□ -0.76
USF1-204ENST00000472217 CDH23Q9H251 3354 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 SIP14410 1827 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 NFASCO94856 1347 aa10.3□□□□□ -0.76
USF1-204ENST00000472217 LCHNA4D1U4 455 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 EPOPA6NHQ4 379 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 KIF28PB7ZC32 967 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 FAM86B1E9PN63 330 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 MEIS1O00470 390 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 FAM86B2P0C5J1 330 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 ZNF76P36508 570 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 EVCP57679 992 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 ACTR2P61160 394 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 CCT2P78371 535 aaKnown RBP10.29□□□□□ -0.76
USF1-204ENST00000472217 PPFIA1Q13136 1202 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 MKRN4PQ13434 485 aaPredicted RBP10.29□□□□□ -0.76
USF1-204ENST00000472217 GRIK4Q16099 956 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 PLEKHG4Q58EX7 1191 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 RUFY4Q6ZNE9 571 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 NIPA1Q7RTP0 329 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 REXO1Q8N1G1 1221 aaKnown RBP10.29□□□□□ -0.76
USF1-204ENST00000472217 CCDC12Q8WUD4 166 aaPredicted RBP10.29□□□□□ -0.76
USF1-204ENST00000472217 CRYGNQ8WXF5 182 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 ZBED2Q9BTP6 218 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 COL25A1Q9BXS0 654 aaPredicted RBP10.29□□□□□ -0.76
USF1-204ENST00000472217 RNF26Q9BY78 433 aaPredicted RBP10.29□□□□□ -0.76
USF1-204ENST00000472217 UPF3BQ9BZI7 483 aaKnown RBP10.29□□□□□ -0.76
USF1-204ENST00000472217 SMARCAD1Q9H4L7 1026 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 AGO4Q9HCK5 861 aaKnown RBP10.29□□□□□ -0.76
USF1-204ENST00000472217 C6orf50Q9HD87 102 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 PPP4R2Q9NY27 417 aa10.29□□□□□ -0.76
USF1-204ENST00000472217 TUBE1Q9UJT0 475 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms