RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC3-205ENST00000462715 ACER1Q8TDN7 264 aa12.67□□□□□ -0.38
TRAPPC3-205ENST00000462715 IRX2Q9BZI1 471 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC3-205ENST00000462715 GOPCQ9HD26 462 aa12.67□□□□□ -0.38
TRAPPC3-205ENST00000462715 ZSWIM5Q9P217 1185 aa12.67□□□□□ -0.38
TRAPPC3-205ENST00000462715 TMX2Q9Y320 296 aa12.67□□□□□ -0.38
TRAPPC3-205ENST00000462715 MFAP3LO75121 409 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 ERCC5P28715 1186 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 PBX1P40424 430 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 NT5DC1Q5TFE4 455 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 MMGT1Q8N4V1 131 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 FTOQ9C0B1 505 aaKnown RBP eCLIP12.66□□□□□ -0.385e-6■■■□□ 14.7
TRAPPC3-205ENST00000462715 IL17RBQ9NRM6 502 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 SAMM50Q9Y512 469 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 ANO9A1A5B4 782 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 SOWAHDA6NJG2 315 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 CTDNEP1O95476 244 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 LSP1P33241 339 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 GOLGA8FQ08AF8 430 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 GOLGA8DPQ0D2H9 430 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.381e-6■■■□□ 16.3
TRAPPC3-205ENST00000462715 LMBR1Q8WVP7 490 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 LPAR1Q92633 364 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 MKL1Q969V6 931 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 ZIC5Q96T25 663 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 RUFY1Q96T51 708 aa12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 TPX2Q9ULW0 747 aaKnown RBP12.66□□□□□ -0.38
TRAPPC3-205ENST00000462715 PTPRFP10586 1907 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 A0A1W2PRG0 241 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 NMT2O60551 498 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 HSF2BPO75031 334 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 PPP1R37O75864 691 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 ALDH1A1P00352 501 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 EPHB4P54760 987 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 SLC39A14Q15043 492 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 ZYXQ15942 572 aaKnown RBP12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 PTGISQ16647 500 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 ANO1Q5XXA6 986 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 DGKHQ86XP1 1220 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 CEP57Q86XR8 500 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 SIAH1Q8IUQ4 282 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 CCDC170Q8IYT3 715 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 ARFGAP2Q8N6H7 521 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 KLHL23Q8NBE8 558 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 C12orf42Q96LP6 360 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 HAUS4Q9H6D7 363 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 SAR1BQ9Y6B6 198 aa12.65□□□□□ -0.38
TRAPPC3-205ENST00000462715 MYSM1Q5VVJ2 828 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 CYP26C1Q6V0L0 522 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 DHX32Q7L7V1 743 aaKnown RBP12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 ANKRD23Q86SG2 305 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 RIN2Q8WYP3 895 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 ZKSCAN3Q9BRR0 538 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 MTA3Q9BTC8 594 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 AGTPBP1Q9UPW5 1226 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 LOC285556D6RIA3 1793 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 TNKSO95271 1327 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 NOVP48745 357 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 PDIA5Q14554 519 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 GLE1Q53GS7 698 aaKnown RBP12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 RNF187Q5TA31 235 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 CYB5R4Q7L1T6 521 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 NLRP14Q86W24 1093 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 TRIM58Q8NG06 486 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 SPDL1Q96EA4 605 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 KIF9Q9HAQ2 790 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 SLC45A1Q9Y2W3 748 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 PCNTO95613 3336 aa12.64□□□□□ -0.39
TRAPPC3-205ENST00000462715 BTBD19C9JJ37 291 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 IFIT3O14879 490 aaKnown RBP12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 RAD21O60216 631 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 DTNBO60941 627 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 RAB27AP51159 221 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 MOGSQ13724 837 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 MTF1Q14872 753 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 KIAA0753Q2KHM9 967 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 CAPRIN2Q6IMN6 1127 aaKnown RBP12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 SDCCAG8Q86SQ7 713 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 LRRC47Q8N1G4 583 aaKnown RBP12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 ZFAND2BQ8WV99 257 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 SPAG5Q96R06 1193 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 PNMA3Q9UL41 463 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 MYH4Q9Y623 1939 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 ABLIM1O14639 778 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 PRC1O43663 620 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 VCAM1P19320 739 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 IFIT1BQ5T764 474 aaKnown RBP12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 RESP18Q5W5W9 173 aa12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 ENAHQ8N8S7 591 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC3-205ENST00000462715 GMCL1P1Q8NEA9 526 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms