RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 CASKIN2Q8WXE0 1202 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 EMILIN3Q9NT22 766 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 GRIN2DO15399 1336 aa15.82■□□□□ 0.12
ERCC3-202ENST00000426778 RSPH10B2B2RC85 870 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 RSPH10BP0C881 870 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 PPP1R2P41236 205 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 ZNF543Q08ER8 600 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 KCNH2Q12809 1159 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 NFIAQ12857 509 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 USH1GQ495M9 461 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 BARGINQ6ZT62 677 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 CEP72Q9P209 647 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 ATP6V0A2Q9Y487 856 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 CLIC2O15247 247 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 NR2F2P24468 414 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 CORO7P57737 925 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 PTK2Q05397 1052 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 NNTQ13423 1086 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 HLTFQ14527 1009 aaKnown RBP eCLIP15.81■□□□□ 0.122e-6■■■■□ 23.7
ERCC3-202ENST00000426778 CUL5Q93034 780 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 P2RX7Q99572 595 aaKnown RBP15.81■□□□□ 0.12
ERCC3-202ENST00000426778 TSPYL1Q9H0U9 437 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 MYH4Q9Y623 1939 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 PNMA6FA0A0J9YX94 578 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 ZNF233A6NK53 670 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 RAD51CO43502 376 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 SERPING1P05155 500 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 HPDP32754 393 aaPredicted RBP15.81■□□□□ 0.12
ERCC3-202ENST00000426778 PDIA5Q14554 519 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 PRR16Q569H4 304 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 TBC1D16Q8TBP0 767 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 RIC8AQ9NPQ8 531 aa15.81■□□□□ 0.12
ERCC3-202ENST00000426778 BMP2KQ9NSY1 1161 aaPredicted RBP15.81■□□□□ 0.12
ERCC3-202ENST00000426778 AJAP1Q9UKB5 411 aaPredicted RBP15.81■□□□□ 0.12
ERCC3-202ENST00000426778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.8■□□□□ 0.12
ERCC3-202ENST00000426778 ESYT2A0FGR8 921 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 GRID2IPA4D2P6 1211 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 TMCO5BA8MYB1 307 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 PJA2O43164 708 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 ARSHQ5FYA8 562 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 CERS5Q8N5B7 392 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 BACH1O14867 736 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 CYP11B2P19099 503 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 CASP4P49662 377 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 PPFIA1Q13136 1202 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 CFAP58Q5T655 872 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
ERCC3-202ENST00000426778 MAATS1Q7Z4T9 603 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 KSR1Q8IVT5 923 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 TRIM59Q8IWR1 403 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 USP40Q9NVE5 1235 aa15.8■□□□□ 0.12
ERCC3-202ENST00000426778 TTLL1O95922 423 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 MYBP10242 640 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 MAGEA9P43362 315 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 ASIC2Q16515 512 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 SLC18A3Q16572 532 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 ASPRV1Q53RT3 343 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 COBLL1Q53SF7 1204 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 ZNF571Q7Z3V5 609 aaPredicted RBP15.79■□□□□ 0.12
ERCC3-202ENST00000426778 CYP2W1Q8TAV3 490 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 SPAG5Q96R06 1193 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 KCNQ5Q9NR82 932 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 CEP104O60308 925 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 PRLRP16471 622 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 POLD1P28340 1107 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 SEC24CP53992 1094 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 SF3A3Q12874 501 aaKnown RBP eCLIP15.79■□□□□ 0.123e-11■■□□□ 13.1
ERCC3-202ENST00000426778 NAB2Q15742 525 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 TTC31Q49AM3 519 aaPredicted RBP15.79■□□□□ 0.12
ERCC3-202ENST00000426778 ADAT2Q7Z6V5 191 aaKnown RBP15.79■□□□□ 0.12
ERCC3-202ENST00000426778 RNPC3Q96LT9 517 aaKnown RBP15.79■□□□□ 0.12
ERCC3-202ENST00000426778 LRRC4BQ9NT99 713 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 SERPINB13Q9UIV8 391 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 PCDHA2Q9Y5H9 948 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 PCDHA1Q9Y5I3 950 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 FAM169AQ9Y6X4 670 aa15.79■□□□□ 0.12
ERCC3-202ENST00000426778 SSU72P8A0A1W2PR75 194 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 SMCHD1A6NHR9 2005 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 EIF3HO15372 352 aaKnown RBP eCLIP15.78■□□□□ 0.12
ERCC3-202ENST00000426778 SHOX2O60902 331 aaPredicted RBP15.78■□□□□ 0.12
ERCC3-202ENST00000426778 QRICH1Q2TAL8 776 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 NAA35Q5VZE5 725 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 SFR1Q86XK3 245 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 CCDC65Q8IXS2 484 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 KCTD10Q9H3F6 313 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 HDAC9Q9UKV0 1011 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 HOXA13P31271 388 aaPredicted RBP15.78■□□□□ 0.12
ERCC3-202ENST00000426778 SHMT1P34896 483 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 EMBQ6PCB8 327 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 IFT20Q8IY31 132 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 RBM46Q8TBY0 533 aaKnown RBP15.78■□□□□ 0.12
ERCC3-202ENST00000426778 SH3GL2Q99962 352 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 DDX47Q9H0S4 455 aaKnown RBP15.78■□□□□ 0.12
ERCC3-202ENST00000426778 EBAG9O00559 213 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 ZBTB39O15060 712 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 ZBTB5O15062 677 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 IL1R1P14778 569 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 PLCG2P16885 1265 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 COPB2P35606 906 aa15.78■□□□□ 0.12
ERCC3-202ENST00000426778 MRPL12P52815 198 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms