RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 DKK3Q9UBP4 350 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SH3GLB1Q9Y371 365 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SPDYE3A6NKU9 549 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SMNDC1O75940 238 aaKnown RBP eCLIP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 OCA2Q04671 838 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 IP6K1Q92551 441 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SYMPKQ92797 1274 aaKnown RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ARL8AQ96BM9 186 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 NR1H4Q96RI1 486 aaPredicted RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 KIAA1210Q9ULL0 1709 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 S100A1P23297 94 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 CCNE1P24864 410 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 SKIV2L2P42285 1042 aaKnown RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 TPD52P55327 224 aaPredicted RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 PASD1Q8IV76 773 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 OGFOD1Q8N543 542 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 RBM41Q96IZ5 413 aaKnown RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 FERMT1Q9BQL6 677 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 ZBTB3Q9H5J0 574 aa10.78□□□□□ -0.68
PTPRM-203ENST00000400060 CTDP1Q9Y5B0 961 aaPredicted RBP10.78□□□□□ -0.68
PTPRM-203ENST00000400060 MAN1A2O60476 641 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 CALB2P22676 271 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 TFCP2Q12800 502 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 CADPS2Q86UW7 1296 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 CCDC82Q8N4S0 544 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 STKLD1Q8NE28 680 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 STK32AQ8WU08 396 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 ATXN2LQ8WWM7 1075 aaKnown RBP10.77□□□□□ -0.68
PTPRM-203ENST00000400060 CCDC138Q96M89 665 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 RIC8AQ9NPQ8 531 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 MED23Q9ULK4 1368 aa10.77□□□□□ -0.68
PTPRM-203ENST00000400060 SMIM31A0A1B0GVY4 71 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 PDLIM1O00151 329 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 STK10O94804 968 aaKnown RBP10.77□□□□□ -0.69
PTPRM-203ENST00000400060 KRT14P02533 472 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 PLTPP55058 493 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 PLCB3Q01970 1234 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 TRMT10CQ7L0Y3 403 aaKnown RBP10.77□□□□□ -0.69
PTPRM-203ENST00000400060 PRMT1Q99873 361 aaKnown RBP10.77□□□□□ -0.69
PTPRM-203ENST00000400060 IRX2Q9BZI1 471 aaPredicted RBP10.77□□□□□ -0.69
PTPRM-203ENST00000400060 METTL14Q9HCE5 456 aaKnown RBP10.77□□□□□ -0.69
PTPRM-203ENST00000400060 C6orf50Q9HD87 102 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 TRMT112Q9UI30 125 aaKnown RBP10.77□□□□□ -0.69
PTPRM-203ENST00000400060 IQGAP1P46940 1657 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 PLEKHG3A1L390 1219 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 KRT4P19013 534 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 POLD1P28340 1107 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 MTA1Q13330 715 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 TBCCQ15814 346 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 CC2D2BQ6DHV5 1058 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 ZCRB1Q8TBF4 217 aaKnown RBP10.77□□□□□ -0.69
PTPRM-203ENST00000400060 INPP5DQ92835 1189 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.69
PTPRM-203ENST00000400060 LRGUKQ96M69 825 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 RILPQ96NA2 401 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 EFHD1Q9BUP0 239 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 NT5C3AQ9H0P0 336 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 GID8Q9NWU2 228 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 ECEL1O95672 775 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 BAG3O95817 575 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 NFRKBQ6P4R8 1299 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 LDHAL6AQ6ZMR3 332 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 TATDN2Q93075 761 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 ADGRB2O60241 1585 aa10.77□□□□□ -0.69
PTPRM-203ENST00000400060 SYNGAP1Q96PV0 1343 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 CBFA2T3O75081 653 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 MCF2P10911 925 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 TUBA4AP68366 448 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 AP1B1Q10567 949 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 PAF1Q8N7H5 531 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 PPP4R1Q8TF05 950 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 TTC25Q96NG3 672 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 BLZF1Q9H2G9 400 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 NCKAP5LQ9HCH0 1330 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 USP32Q8NFA0 1604 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 TMEM110-MUSTN1A8MSY1 372 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 A8MXQ7 604 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 CES2O00748 559 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 CYP21A2P08686 494 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 PDE4BQ07343 736 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 DCTN2Q13561 401 aaKnown RBP10.76□□□□□ -0.69
PTPRM-203ENST00000400060 CAVIN4Q5BKX8 364 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 GALNT17Q6IS24 598 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 KCNV1Q6PIU1 500 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 RIBC1Q8N443 379 aaPredicted RBP10.76□□□□□ -0.69
PTPRM-203ENST00000400060 SNX29Q8TEQ0 813 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 ZKSCAN3Q9BRR0 538 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 SMG5Q9UPR3 1016 aaKnown RBP10.76□□□□□ -0.69
PTPRM-203ENST00000400060 TACC3Q9Y6A5 838 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 MIF4GDA9UHW6 222 aaKnown RBP10.76□□□□□ -0.69
PTPRM-203ENST00000400060 ADCY3O60266 1144 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 MMP1P03956 469 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 GNA11P29992 359 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 CXCR5P32302 372 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 ADARP55265 1226 aaKnown RBP10.76□□□□□ -0.69
PTPRM-203ENST00000400060 ITGA9Q13797 1035 aa10.76□□□□□ -0.69
PTPRM-203ENST00000400060 MRPL40Q9NQ50 206 aaKnown RBP10.76□□□□□ -0.69
PTPRM-203ENST00000400060 CYP39A1Q9NYL5 469 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms