RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 EPC1Q9H2F5 836 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 ZNF277Q9NRM2 450 aaPredicted RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 PGAP2Q9UHJ9 254 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 TRAF3IP3Q9Y228 551 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 RCCD1A6NED2 376 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 GCOM1H8Y6P7 765 aaPredicted RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 ZNF263O14978 683 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 EYA4O95677 639 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 POLR2MP0CAP2 368 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 CACNB1Q02641 598 aaPredicted RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 PABPC4Q13310 644 aaKnown RBP eCLIP18.56■□□□□ 0.56
NUP50-202ENST00000396096 BMT2Q1RMZ1 405 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 CC2D1AQ6P1N0 951 aaPredicted RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 CYP2W1Q8TAV3 490 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 SYN2Q92777 582 aaPredicted RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 EIF2AK1Q9BQI3 630 aaKnown RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 REEP2Q9BRK0 252 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 LACRTQ9GZZ8 138 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 NUCKS1Q9H1E3 243 aaKnown RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 DEFB129Q9H1M3 183 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 TUFT1Q9NNX1 390 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 PUF60Q9UHX1 559 aaKnown RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 ZNRF3Q9ULT6 936 aa18.56■□□□□ 0.56
NUP50-202ENST00000396096 MRPL11Q9Y3B7 192 aaKnown RBP18.56■□□□□ 0.56
NUP50-202ENST00000396096 ANO9A1A5B4 782 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 LRRC53A6NM62 1247 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 CAP2P40123 477 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 MAPK8IP2Q13387 824 aaPredicted RBP18.55■□□□□ 0.56
NUP50-202ENST00000396096 BRD3Q15059 726 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 SPA17Q15506 151 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 NELFCDQ8IXH7 590 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 SLC5A5Q92911 643 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 EHMT1Q9H9B1 1298 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 CEP72Q9P209 647 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 FEM1BQ9UK73 627 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 RAB21Q9UL25 225 aa18.55■□□□□ 0.56
NUP50-202ENST00000396096 SSU72P8A0A1W2PR75 194 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 CTAGE15A4D2H0 777 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 CCDC151A5D8V7 595 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 MEIS1O00470 390 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 PSMD10O75832 226 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 CTAGE8P0CG41 777 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 DPEP1P16444 411 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 MUTP22033 750 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 KIF5AQ12840 1032 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 PPP2R5CQ13362 524 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 CTAGE6Q86UF2 777 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 CTAGE4Q8IX94 777 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 HSD17B14Q9BPX1 270 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 WDR18Q9BV38 432 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 TANGO6Q9C0B7 1094 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 ANKZF1Q9H8Y5 726 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 ZBTB12Q9Y330 459 aaPredicted RBP18.54■□□□□ 0.56
NUP50-202ENST00000396096 EML1O00423 815 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 CETN3O15182 167 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 CFBP00751 764 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 PLEKP08567 350 aaPredicted RBP18.54■□□□□ 0.56
NUP50-202ENST00000396096 KIF11P52732 1056 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 GABPB1Q06547 395 aaPredicted RBP18.54■□□□□ 0.56
NUP50-202ENST00000396096 RAD51AP2Q09MP3 1159 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 ADAM9Q13443 819 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 ASTE1Q2TB18 679 aaPredicted RBP18.54■□□□□ 0.56
NUP50-202ENST00000396096 RRAGAQ7L523 313 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 OTOP1Q7RTM1 612 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 SFR1Q86XK3 245 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 TMEM39BQ9GZU3 492 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 VEZTQ9HBM0 779 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 TFR2Q9UP52 801 aa18.54■□□□□ 0.56
NUP50-202ENST00000396096 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.54■□□□□ 0.56
NUP50-202ENST00000396096 PDXKO00764 312 aa18.53■□□□□ 0.56
NUP50-202ENST00000396096 NOL4O94818 638 aa18.53■□□□□ 0.56
NUP50-202ENST00000396096 EIF4A3P38919 411 aaKnown RBP18.53■□□□□ 0.56
NUP50-202ENST00000396096 CASP5P51878 434 aa18.53■□□□□ 0.56
NUP50-202ENST00000396096 KNOP1Q1ED39 458 aaKnown RBP18.53■□□□□ 0.56
NUP50-202ENST00000396096 NIM1KQ8IY84 436 aa18.53■□□□□ 0.56
NUP50-202ENST00000396096 SMCR8Q8TEV9 937 aaPredicted RBP18.53■□□□□ 0.56
NUP50-202ENST00000396096 HNRNPLLQ8WVV9 542 aaKnown RBP18.53■□□□□ 0.56
NUP50-202ENST00000396096 TBC1D5Q92609 795 aa18.53■□□□□ 0.56
NUP50-202ENST00000396096 PDGFDQ9GZP0 370 aaPredicted RBP18.53■□□□□ 0.56
NUP50-202ENST00000396096 ZSWIM4Q9H7M6 989 aa18.53■□□□□ 0.56
NUP50-202ENST00000396096 RABGAP1Q9Y3P9 1069 aa18.53■□□□□ 0.56
NUP50-202ENST00000396096 PCDHA13Q9Y5I0 950 aa18.53■□□□□ 0.56
NUP50-202ENST00000396096 LOXHD1Q8IVV2 1947 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 PJA2O43164 708 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 USO1O60763 962 aaKnown RBP18.52■□□□□ 0.56
NUP50-202ENST00000396096 TUBBP07437 444 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 GAP43P17677 238 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 HOXD13P35453 343 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 CYP27A1Q02318 531 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 CCDC174Q6PII3 467 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 CACNA2D4Q7Z3S7 1137 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 FRMD5Q7Z6J6 570 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 BHMT2Q9H2M3 363 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 ARFGAP3Q9NP61 516 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 OLFML3Q9NRN5 406 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 SAR1BQ9Y6B6 198 aa18.52■□□□□ 0.56
NUP50-202ENST00000396096 TBC1D8O95759 1140 aa18.52■□□□□ 0.55
NUP50-202ENST00000396096 ATP1A1P05023 1023 aaKnown RBP18.52■□□□□ 0.55
NUP50-202ENST00000396096 LRCH2Q5VUJ6 765 aa18.52■□□□□ 0.55
NUP50-202ENST00000396096 HGSNATQ68CP4 663 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms