RNA–Protein interactions for RNA: ENST00000393328.6

SPOP-202, Transcript of speckle type BTB/POZ protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOP, Length 2,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-202ENST00000393328 IGKV6D-41A0A0C4DH26 115 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 RPSAP08865 295 aaKnown RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 SETQ01105 290 aaPredicted RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 LRRC41Q15345 812 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SPA17Q15506 151 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SPRED3Q2MJR0 410 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 ZNF658Q5TYW1 1059 aaPredicted RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 STRIP1Q5VSL9 837 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 KCNK18Q7Z418 384 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 CDK5RAP3Q96JB5 506 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 CSRNP1Q96S65 589 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 IFIH1Q9BYX4 1025 aaKnown RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 GOLPH3Q9H4A6 298 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 MMRN2Q9H8L6 949 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 PNMA6FA0A0J9YX94 578 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 MCM3P25205 808 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 HOXA13P31271 388 aaPredicted RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 CYLC1P35663 651 aaPredicted RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 ECE1P42892 770 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 KRT83P78385 493 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 RASSF7Q02833 373 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SF3B2Q13435 895 aaKnown RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 C8orf74Q6P047 294 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SIAH1Q8IUQ4 282 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 KLHL7Q8IXQ5 586 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 PI4KBQ9UBF8 816 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 MYH10P35580 1976 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 KLRC4O43908 158 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 AKR1B10O60218 316 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SKAP2O75563 359 aaPredicted RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 FTCDO95954 541 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 STAT3P40763 770 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 PSEN1P49768 467 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 RBM26Q5T8P6 1007 aaKnown RBP12.42□□□□□ -0.42
SPOP-202ENST00000393328 GALNT17Q6IS24 598 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 FLAD1Q8NFF5 587 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 GIMAP7Q8NHV1 300 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SNX29Q8TEQ0 813 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 CABS1Q96KC9 395 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 CEP89Q96ST8 783 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SLC24A3Q9HC58 644 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SWAP70Q9UH65 585 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SNX12Q9UMY4 172 aa12.42□□□□□ -0.42
SPOP-202ENST00000393328 SMCHD1A6NHR9 2005 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 LGALS16A8MUM7 142 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 F5H6K3 240 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 TUBBP07437 444 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 CCDC172P0C7W6 258 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 TMOD1P28289 359 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 LSP1P33241 339 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 RDXP35241 583 aaKnown RBP12.41□□□□□ -0.42
SPOP-202ENST00000393328 GFPT1Q06210 699 aaPredicted RBP12.41□□□□□ -0.42
SPOP-202ENST00000393328 KLRC3Q07444 240 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 ECM1Q16610 540 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 NAA35Q5VZE5 725 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 MSL3Q8N5Y2 521 aaKnown RBP12.41□□□□□ -0.42
SPOP-202ENST00000393328 OSBPL9Q96SU4 736 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 STK32BQ9NY57 414 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 COL11A2P13942 1736 aaPredicted RBP12.41□□□□□ -0.42
SPOP-202ENST00000393328 ZNF233A6NK53 670 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 EIF4A3P38919 411 aaKnown RBP12.41□□□□□ -0.42
SPOP-202ENST00000393328 UBXN2AP68543 259 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 CDC37Q16543 378 aaPredicted RBP12.41□□□□□ -0.42
SPOP-202ENST00000393328 ABCB5Q2M3G0 1257 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 CFAP58Q5T655 872 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 HAUS3Q68CZ6 603 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 LARGE2Q8N3Y3 721 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 N4BP2L2Q92802 583 aaPredicted RBP12.41□□□□□ -0.42
SPOP-202ENST00000393328 NOC4LQ9BVI4 516 aaKnown RBP12.41□□□□□ -0.42
SPOP-202ENST00000393328 ZHX3Q9H4I2 956 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 EXOC1Q9NV70 894 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 CAPN11Q9UMQ6 739 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 SUGT1Q9Y2Z0 365 aa12.41□□□□□ -0.42
SPOP-202ENST00000393328 A0A1W2PRG0 241 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 LRRC10BA6NIK2 292 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 OPLAHO14841 1288 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 ZBTB5O15062 677 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 TUBB4BP68371 445 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 SPAG1Q07617 926 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 DDX42Q86XP3 938 aaKnown RBP eCLIP12.4□□□□□ -0.42
SPOP-202ENST00000393328 ACER1Q8TDN7 264 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 CALML4Q96GE6 196 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 KRT12Q99456 494 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 P2RX7Q99572 595 aaKnown RBP12.4□□□□□ -0.42
SPOP-202ENST00000393328 DNAJC7Q99615 494 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 TRIM9Q9C026 710 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 DDX25Q9UHL0 483 aaKnown RBP12.4□□□□□ -0.42
SPOP-202ENST00000393328 TARSL2A2RTX5 802 aaKnown RBP12.4□□□□□ -0.42
SPOP-202ENST00000393328 MEFVO15553 781 aaPredicted RBP12.4□□□□□ -0.42
SPOP-202ENST00000393328 SNHG28P0DPA3 235 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 FECHP22830 423 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 GRB10Q13322 594 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 HLTFQ14527 1009 aaKnown RBP eCLIP12.4□□□□□ -0.42
SPOP-202ENST00000393328 CEP85LQ5SZL2 805 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 RRAGAQ7L523 313 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 ADSSL1Q8N142 457 aa12.4□□□□□ -0.42
SPOP-202ENST00000393328 ZNF473Q8WTR7 871 aaKnown RBP12.4□□□□□ -0.42
SPOP-202ENST00000393328 CUL5Q93034 780 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms