RNA–Protein interactions for RNA: ENST00000376094.8

TUBD1-204, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-204ENST00000376094 CHMP4AQ9BY43 222 aa6□□□□□ -1.45
TUBD1-204ENST00000376094 SMOC1Q9H4F8 434 aa6□□□□□ -1.45
TUBD1-204ENST00000376094 SLC6A20Q9NP91 592 aa6□□□□□ -1.45
TUBD1-204ENST00000376094 MC3RP41968 323 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 AFF3P51826 1226 aaKnown RBP5.99□□□□□ -1.45
TUBD1-204ENST00000376094 GUCY1A3Q02108 690 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 ZNF460Q14592 562 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 BRDTQ58F21 947 aaPredicted RBP5.99□□□□□ -1.45
TUBD1-204ENST00000376094 OTOP3Q7RTS5 596 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 STRA8Q7Z7C7 330 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 SIAH1Q8IUQ4 282 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 TRIM48Q8IWZ4 208 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 FAM126BQ8IXS8 530 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 PIP4K2CQ8TBX8 421 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 DACT3Q96B18 629 aaPredicted RBP5.99□□□□□ -1.45
TUBD1-204ENST00000376094 IPPKQ9H8X2 491 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 TRIM39Q9HCM9 518 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 EPB41L4AQ9HCS5 686 aaPredicted RBP5.99□□□□□ -1.45
TUBD1-204ENST00000376094 TYW1Q9NV66 732 aaKnown RBP5.99□□□□□ -1.45
TUBD1-204ENST00000376094 CHPF2Q9P2E5 772 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 MYOTQ9UBF9 498 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 PMF1-BGLAPU3KQ54 211 aa5.99□□□□□ -1.45
TUBD1-204ENST00000376094 TCRBV5S2A0A599 114 aa5.98□□□□□ -1.45
TUBD1-204ENST00000376094 FAM83GA6ND36 823 aa5.98□□□□□ -1.45
TUBD1-204ENST00000376094 ZSCAN22P10073 491 aaPredicted RBP5.98□□□□□ -1.45
TUBD1-204ENST00000376094 CYP2C8P10632 490 aa5.98□□□□□ -1.45
TUBD1-204ENST00000376094 CD300LDQ6UXZ3 194 aa5.98□□□□□ -1.45
TUBD1-204ENST00000376094 RAVER1Q8IY67 606 aaKnown RBP5.98□□□□□ -1.45
TUBD1-204ENST00000376094 SMARCC2Q8TAQ2 1214 aa5.98□□□□□ -1.45
TUBD1-204ENST00000376094 LEO1Q8WVC0 666 aaPredicted RBP5.98□□□□□ -1.45
TUBD1-204ENST00000376094 MAGEC2Q9UBF1 373 aaPredicted RBP5.98□□□□□ -1.45
TUBD1-204ENST00000376094 MAPRE3Q9UPY8 281 aa5.98□□□□□ -1.45
TUBD1-204ENST00000376094 TNPO3Q9Y5L0 923 aaKnown RBP5.98□□□□□ -1.45
TUBD1-204ENST00000376094 GSTA4O15217 222 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 KPNA6O60684 536 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 RASGRP1O95267 797 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 C8BP07358 591 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 NKX3-2P78367 333 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 CAP1Q01518 475 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 TRIM61Q5EBN2 209 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 PKN3Q6P5Z2 889 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 AFAP1L2Q8N4X5 818 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 ATL2Q8NHH9 583 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 FBXW5Q969U6 566 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 SCLYQ96I15 445 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 MAGEB10Q96LZ2 347 aaPredicted RBP5.97□□□□□ -1.45
TUBD1-204ENST00000376094 ASH2LQ9UBL3 628 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 MCM8Q9UJA3 840 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 THRAP3Q9Y2W1 955 aaKnown RBP5.97□□□□□ -1.45
TUBD1-204ENST00000376094 PCDHA8Q9Y5H6 950 aa5.97□□□□□ -1.45
TUBD1-204ENST00000376094 ARVCFO00192 962 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 WNT9AO14904 365 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 SLC27A2O14975 620 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 OPA1O60313 960 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 CRTAMO95727 393 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 COL6A2P12110 1019 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 NEK4P51957 841 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 STRN3Q13033 797 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 PCBP1Q15365 356 aaKnown RBP eCLIP5.96□□□□□ -1.46
TUBD1-204ENST00000376094 SEPT7Q16181 437 aaKnown RBP5.96□□□□□ -1.46
TUBD1-204ENST00000376094 FAM47CQ5HY64 1035 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 LHFPL2Q6ZUX7 228 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 ZC3H7AQ8IWR0 971 aaKnown RBP5.96□□□□□ -1.46
TUBD1-204ENST00000376094 ARRDC4Q8NCT1 418 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 GSTCDQ8NEC7 633 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 UHMK1Q8TAS1 419 aaKnown RBP5.96□□□□□ -1.46
TUBD1-204ENST00000376094 FNIP1Q8TF40 1166 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 DDX1Q92499 740 aaKnown RBP5.96□□□□□ -1.46
TUBD1-204ENST00000376094 TOE1Q96GM8 510 aaKnown RBP5.96□□□□□ -1.46
TUBD1-204ENST00000376094 CEP89Q96ST8 783 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 INTS7Q9NVH2 962 aaKnown RBP5.96□□□□□ -1.46
TUBD1-204ENST00000376094 DTLQ9NZJ0 730 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 DSEQ9UL01 958 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 PCDHA9Q9Y5H5 950 aa5.96□□□□□ -1.46
TUBD1-204ENST00000376094 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.95□□□□□ -1.46
TUBD1-204ENST00000376094 PLA2G1BP04054 148 aaKnown RBP5.95□□□□□ -1.46
TUBD1-204ENST00000376094 SRGAP2CP0DJJ0 459 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 STAT5AP42229 794 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 ST5P78524 1137 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 HTRA3P83110 453 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 HABP4Q5JVS0 413 aaKnown RBP5.95□□□□□ -1.46
TUBD1-204ENST00000376094 LCNL1Q6ZST4 164 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 FMNL3Q8IVF7 1028 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 FAM26EQ8N5C1 309 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 TTLL11Q8NHH1 800 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 PCDH19Q8TAB3 1148 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 CATSPERZQ9NTU4 200 aa5.95□□□□□ -1.46
TUBD1-204ENST00000376094 BCCIPQ9P287 314 aaKnown RBP eCLIP5.95□□□□□ -1.46
TUBD1-204ENST00000376094 NKRFO15226 690 aaKnown RBP eCLIP5.94□□□□□ -1.46
TUBD1-204ENST00000376094 KATNA1O75449 491 aa5.94□□□□□ -1.46
TUBD1-204ENST00000376094 JMJD7P0C870 316 aa5.94□□□□□ -1.46
TUBD1-204ENST00000376094 GUCY2FP51841 1108 aa5.94□□□□□ -1.46
TUBD1-204ENST00000376094 EXOSC10Q01780 885 aaKnown RBP5.94□□□□□ -1.46
TUBD1-204ENST00000376094 TUSC3Q13454 348 aa5.94□□□□□ -1.46
TUBD1-204ENST00000376094 GPR19Q15760 415 aa5.94□□□□□ -1.46
TUBD1-204ENST00000376094 SKOR2Q2VWA4 1001 aaPredicted RBP5.94□□□□□ -1.46
TUBD1-204ENST00000376094 EP400NLQ6ZTU2 488 aa5.94□□□□□ -1.46
TUBD1-204ENST00000376094 DDX46Q7L014 1031 aaKnown RBP5.94□□□□□ -1.46
TUBD1-204ENST00000376094 C16orf59Q7L2K0 433 aa5.94□□□□□ -1.46
TUBD1-204ENST00000376094 PPM1KQ8N3J5 372 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms