RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 DSTYKQ6XUX3 929 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 TRIML1Q8N9V2 468 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 ERBB4Q15303 1308 aa18.6■□□□□ 0.57
MCF2L-203ENST00000375604 MMEL1Q495T6 779 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 MINPP1Q9UNW1 487 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 ATP8A1Q9Y2Q0 1164 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 ZKSCAN8Q15776 578 aaPredicted RBP18.59■□□□□ 0.57
MCF2L-203ENST00000375604 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 PTPREP23469 700 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 SEPT2Q15019 361 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 CEP120Q8N960 986 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 OR6B3Q8NGW1 331 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 PRPF31Q8WWY3 499 aaKnown RBP18.59■□□□□ 0.57
MCF2L-203ENST00000375604 RPF1Q9H9Y2 349 aaKnown RBP18.59■□□□□ 0.57
MCF2L-203ENST00000375604 STK25O00506 426 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 RNF40O75150 1001 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 CLNS1AP54105 237 aaKnown RBP18.59■□□□□ 0.57
MCF2L-203ENST00000375604 PARVGQ9HBI0 331 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 CHRNA5P30532 468 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 EIF4A3P38919 411 aaKnown RBP18.59■□□□□ 0.57
MCF2L-203ENST00000375604 LINC00301Q8NCQ3 95 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 CDC26Q8NHZ8 85 aa18.59■□□□□ 0.57
MCF2L-203ENST00000375604 PRPF3O43395 683 aaKnown RBP18.58■□□□□ 0.57
MCF2L-203ENST00000375604 ARHGEF1Q92888 912 aaKnown RBP18.58■□□□□ 0.57
MCF2L-203ENST00000375604 CASQ2O14958 399 aaPredicted RBP18.58■□□□□ 0.57
MCF2L-203ENST00000375604 CYP27A1Q02318 531 aa18.58■□□□□ 0.57
MCF2L-203ENST00000375604 ANGPTL3Q9Y5C1 460 aa18.58■□□□□ 0.57
MCF2L-203ENST00000375604 GANCQ8TET4 914 aa18.58■□□□□ 0.56
MCF2L-203ENST00000375604 FEZ2Q9UHY8 353 aaPredicted RBP18.58■□□□□ 0.56
MCF2L-203ENST00000375604 PASKQ96RG2 1323 aa18.58■□□□□ 0.56
MCF2L-203ENST00000375604 WDR46O15213 610 aaKnown RBP18.58■□□□□ 0.56
MCF2L-203ENST00000375604 GAP43P17677 238 aa18.58■□□□□ 0.56
MCF2L-203ENST00000375604 CAPN7Q9Y6W3 813 aa18.58■□□□□ 0.56
MCF2L-203ENST00000375604 ERVV-1B6SEH8 477 aa18.58■□□□□ 0.56
MCF2L-203ENST00000375604 INHBAP08476 426 aa18.58■□□□□ 0.56
MCF2L-203ENST00000375604 DNAJC24Q6P3W2 148 aa18.58■□□□□ 0.56
MCF2L-203ENST00000375604 DHX36Q9H2U1 1008 aaKnown RBP18.58■□□□□ 0.56
MCF2L-203ENST00000375604 OLA1Q9NTK5 396 aaKnown RBP18.58■□□□□ 0.56
MCF2L-203ENST00000375604 LAD1O00515 517 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 EEF1GP26641 437 aaKnown RBP18.57■□□□□ 0.56
MCF2L-203ENST00000375604 PDE1CQ14123 709 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-203ENST00000375604 C10orf76Q5T2E6 689 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 CACTINQ8WUQ7 758 aaKnown RBP18.57■□□□□ 0.56
MCF2L-203ENST00000375604 ZBED2Q9BTP6 218 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 PCP11498 1178 aaKnown RBP18.57■□□□□ 0.56
MCF2L-203ENST00000375604 ATP6V1E2Q96A05 226 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 MXD3Q9BW11 206 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 WDR11Q9BZH6 1224 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 S100BP04271 92 aaPredicted RBP18.57■□□□□ 0.56
MCF2L-203ENST00000375604 RTKN2Q8IZC4 609 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 SIX6OS1Q8N1H7 587 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 COA1Q9GZY4 146 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 LRRC4Q9HBW1 653 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 RNF181Q9P0P0 153 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 MTMR1Q13613 665 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 SNRNP48Q6IEG0 339 aaKnown RBP18.57■□□□□ 0.56
MCF2L-203ENST00000375604 RNF10Q8N5U6 811 aaKnown RBP18.57■□□□□ 0.56
MCF2L-203ENST00000375604 OTUD5Q96G74 571 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 CAPS2Q9BXY5 557 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 CPP00450 1065 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 SLITRK6Q9H5Y7 841 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 POLR3EQ9NVU0 708 aa18.57■□□□□ 0.56
MCF2L-203ENST00000375604 ZCCHC11Q5TAX3 1644 aaKnown RBP18.57■□□□□ 0.56
MCF2L-203ENST00000375604 EFCAB8A8MWE9 144 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 THOC1Q96FV9 657 aaKnown RBP18.56■□□□□ 0.56
MCF2L-203ENST00000375604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.56■□□□□ 0.568e-8■□□□□ 11.2
MCF2L-203ENST00000375604 ADGRL3Q9HAR2 1447 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 KLHL14Q9P2G3 628 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 SERPINB6P35237 376 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 PCDHA13Q9Y5I0 950 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 PIK3R2O00459 728 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 ANXA13P27216 316 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 GARSP41250 739 aaKnown RBP18.56■□□□□ 0.56
MCF2L-203ENST00000375604 POTEDQ86YR6 584 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 LMNTD2Q8IXW0 634 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 MIPOL1Q8TD10 442 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 DYDC2Q96IM9 177 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 COL15A1P39059 1388 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 FRMD3A2A2Y4 597 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 TYW5A2RUC4 315 aaKnown RBP18.56■□□□□ 0.56
MCF2L-203ENST00000375604 GOLGA8KD6RF30 607 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 ARHGEF18Q6ZSZ5 1173 aa18.56■□□□□ 0.56
MCF2L-203ENST00000375604 DHTKD1Q96HY7 919 aaPredicted RBP18.56■□□□□ 0.56
MCF2L-203ENST00000375604 CPSF3Q9UKF6 684 aaKnown RBP18.56■□□□□ 0.56
MCF2L-203ENST00000375604 E9PMD0 336 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 ARID5BQ14865 1188 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 HABP4Q5JVS0 413 aaKnown RBP18.55■□□□□ 0.56
MCF2L-203ENST00000375604 CYFIP1Q7L576 1253 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 LRRC8CQ8TDW0 803 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 GSDMAQ96QA5 445 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 RNF123Q5XPI4 1314 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 PRR29P0C7W0 189 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 TEX2Q8IWB9 1127 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 SLC16A4O15374 487 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 MAN2A1Q16706 1144 aa18.55■□□□□ 0.56
MCF2L-203ENST00000375604 HP1BP3Q5SSJ5 553 aaPredicted RBP18.55■□□□□ 0.56
MCF2L-203ENST00000375604 TYW1Q9NV66 732 aaKnown RBP18.55■□□□□ 0.56
MCF2L-203ENST00000375604 MOSPD1Q9UJG1 213 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms