RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
CXCL12-202ENST00000374426 C5orf42Q9H799 3197 aa15.9■□□□□ 0.14
CXCL12-202ENST00000374426 TRIOO75962 3097 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 FAM86C2PA6NEL3 165 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 CHRNA1P02708 482 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 IL9P15248 144 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 GPM6BQ13491 265 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 PTCRAQ6ISU1 281 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-202ENST00000374426 TMEM192Q8IY95 271 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 ZNF654Q8IZM8 581 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 GJD3Q8N144 294 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 NEK9Q8TD19 979 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 APBB2Q92870 758 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 MAP4K1Q92918 833 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 RRP36Q96EU6 259 aaKnown RBP15.89■□□□□ 0.13
CXCL12-202ENST00000374426 ARIH1Q9Y4X5 557 aaPredicted RBP15.89■□□□□ 0.13
CXCL12-202ENST00000374426 NRCAMQ92823 1304 aa15.89■□□□□ 0.13
CXCL12-202ENST00000374426 GRXCR2A6NFK2 248 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 DDAH1O94760 285 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 SMARCA1P28370 1054 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 KIF5BP33176 963 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 TIGD5Q53EQ6 642 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 RUFY4Q6ZNE9 571 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 RPAINQ86UA6 219 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 BANK1Q8NDB2 785 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 CTCFLQ8NI51 663 aaPredicted RBP15.88■□□□□ 0.13
CXCL12-202ENST00000374426 CUL5Q93034 780 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 HCN4Q9Y3Q4 1203 aa15.88■□□□□ 0.13
CXCL12-202ENST00000374426 H3BQ06 376 aaPredicted RBP15.87■□□□□ 0.13
CXCL12-202ENST00000374426 ATP9AO75110 1047 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 PLEKHA8P1O95397 391 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 LINC00271P0C7V0 271 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 GHRP10912 638 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 KCNA2P16389 499 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 ITGB5P18084 799 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 TCF7P36402 384 aaPredicted RBP15.87■□□□□ 0.13
CXCL12-202ENST00000374426 COL9A3Q14050 684 aaPredicted RBP15.87■□□□□ 0.13
CXCL12-202ENST00000374426 COL19A1Q14993 1142 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 TCEAL5Q5H9L2 206 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 NLRX1Q86UT6 975 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 SRBD1Q8N5C6 995 aaKnown RBP15.87■□□□□ 0.13
CXCL12-202ENST00000374426 GIMAP8Q8ND71 665 aaPredicted RBP15.87■□□□□ 0.13
CXCL12-202ENST00000374426 GPRASP2Q96D09 838 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 IL17RAQ96F46 866 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 EHMT1Q9H9B1 1298 aa15.87■□□□□ 0.13
CXCL12-202ENST00000374426 SEC63Q9UGP8 760 aaKnown RBP15.87■□□□□ 0.13
CXCL12-202ENST00000374426 RBM8AQ9Y5S9 174 aaKnown RBP15.87■□□□□ 0.13
CXCL12-202ENST00000374426 MGAT3Q09327 533 aa15.86■□□□□ 0.13
CXCL12-202ENST00000374426 PPFIA1Q13136 1202 aa15.86■□□□□ 0.13
CXCL12-202ENST00000374426 LPIN1Q14693 890 aa15.86■□□□□ 0.13
CXCL12-202ENST00000374426 TAF2Q6P1X5 1199 aa15.86■□□□□ 0.13
CXCL12-202ENST00000374426 CMTR1Q8N1G2 835 aaKnown RBP15.86■□□□□ 0.13
CXCL12-202ENST00000374426 PABPC5Q96DU9 382 aaKnown RBP15.86■□□□□ 0.13
CXCL12-202ENST00000374426 LZTS2Q9BRK4 669 aa15.86■□□□□ 0.13
CXCL12-202ENST00000374426 NSUN3Q9H649 340 aaKnown RBP15.86■□□□□ 0.13
CXCL12-202ENST00000374426 KAT6AQ92794 2004 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 NLRC5Q86WI3 1866 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 GSTTP1A0A1W2PQM5 241 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 MBLAC1A4D2B0 266 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-202ENST00000374426 C5orf67F2Z3F1 127 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 PRC1O43663 620 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 MARK3P27448 753 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-202ENST00000374426 SSTR3P32745 418 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-202ENST00000374426 PUS10Q3MIT2 529 aaKnown RBP15.85■□□□□ 0.13
CXCL12-202ENST00000374426 MARCH8Q5T0T0 291 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 FIBCD1Q8N539 461 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 SEPT1Q8WYJ6 367 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 CDHR1Q96JP9 859 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 MTA3Q9BTC8 594 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 PSTPIP2Q9H939 334 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 RC3H2Q9HBD1 1191 aaKnown RBP15.85■□□□□ 0.13
CXCL12-202ENST00000374426 TUBE1Q9UJT0 475 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 WDFY4Q6ZS81 3184 aa15.85■□□□□ 0.13
CXCL12-202ENST00000374426 SH2B2O14492 632 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-202ENST00000374426 ENPP3O14638 875 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 RXRAP19793 462 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 CTNNB1P35222 781 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 GNAQP50148 359 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 GRIK4Q16099 956 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 UBE2SQ16763 222 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 CASC1Q6TDU7 716 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 DNAJB3Q8WWF6 145 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 ERAP1Q9NZ08 941 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 PKD2L1Q9P0L9 805 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 UBIAD1Q9Y5Z9 338 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 ADGRA3Q8IWK6 1321 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 RALGAPA2Q2PPJ7 1873 aa15.84■□□□□ 0.13
CXCL12-202ENST00000374426 hCG_1642624A0A1W2PR95 340 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 GRM6O15303 877 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 RB1P06400 928 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 MCM5P33992 734 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 BMPR1AP36894 532 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 MTMR1Q13613 665 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 FBXO47Q5MNV8 452 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 NFXL1Q6ZNB6 911 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 EP400NLQ6ZTU2 488 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 RSPH3Q86UC2 560 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
CXCL12-202ENST00000374426 GLG1Q92896 1179 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms