RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 CA3P07451 260 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 GRB10Q13322 594 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 PFKFB3Q16875 520 aaPredicted RBP9.65□□□□□ -0.86
MSL3-201ENST00000312196 FCHSD1Q86WN1 690 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 SEPT8Q92599 483 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 FAM122AQ96E09 287 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 FAM217BQ9NTX9 383 aaPredicted RBP9.65□□□□□ -0.86
MSL3-201ENST00000312196 RNF216Q9NWF9 866 aaPredicted RBP9.65□□□□□ -0.86
MSL3-201ENST00000312196 FAM50BQ9Y247 325 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 RWDD3Q9Y3V2 267 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 INSL6Q9Y581 213 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 RALGAPA2Q2PPJ7 1873 aa9.65□□□□□ -0.86
MSL3-201ENST00000312196 KDM3AQ9Y4C1 1321 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 IGKV6D-21A0A0A0MT36 114 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 GSTTP1A0A1W2PQM5 241 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 MEIS1O00470 390 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 NOP56O00567 594 aaKnown RBP9.65□□□□□ -0.87
MSL3-201ENST00000312196 NBNO60934 754 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 GJB5O95377 273 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 HOXD11P31277 338 aaPredicted RBP9.65□□□□□ -0.87
MSL3-201ENST00000312196 ADCY7P51828 1080 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 RABGGTBP53611 331 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 PTPROQ16827 1216 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 CHST3Q7LGC8 479 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 NME8Q8N427 588 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 C22orf23Q9BZE7 217 aa9.65□□□□□ -0.87
MSL3-201ENST00000312196 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.87
MSL3-201ENST00000312196 RSPH10B2B2RC85 870 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 AMHP03971 560 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 RB1P06400 928 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 RSPH10BP0C881 870 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 CIITAP33076 1130 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 MGAT3Q09327 533 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 TIGD5Q53EQ6 642 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 WWC2Q6AWC2 1192 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 RSPH3Q86UC2 560 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 BICD2Q8TD16 824 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 RNF26Q9BY78 433 aaPredicted RBP9.64□□□□□ -0.87
MSL3-201ENST00000312196 ZMYND12Q9H0C1 365 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 ERAP1Q9NZ08 941 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 BRPF3Q9ULD4 1205 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 SIP14410 1827 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 GOLGA8AA7E2F4 631 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 GOLGA8BA8MQT2 603 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 ITGB5P18084 799 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 RPS6KB1P23443 525 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 ZNF618Q5T7W0 954 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 GALNT17Q6IS24 598 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 USP17L6PQ6QN14 398 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 RASEFQ8IZ41 740 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 ATP6V0A1Q93050 837 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 SNX14Q9Y5W7 946 aa9.64□□□□□ -0.87
MSL3-201ENST00000312196 MICAL3Q7RTP6 2002 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 ZNF286BP0CG31 522 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 IRX6P78412 446 aaPredicted RBP9.63□□□□□ -0.87
MSL3-201ENST00000312196 SETQ01105 290 aaPredicted RBP9.63□□□□□ -0.87
MSL3-201ENST00000312196 MTMR1Q13613 665 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 NAALADL2Q58DX5 795 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 TMEM31Q5JXX7 168 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 ODR4Q5SWX8 454 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 ANO3Q9BYT9 981 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 AGO4Q9HCK5 861 aaKnown RBP9.63□□□□□ -0.87
MSL3-201ENST00000312196 HCN4Q9Y3Q4 1203 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 GTF3C3Q9Y5Q9 886 aa9.63□□□□□ -0.87
MSL3-201ENST00000312196 COL4A4P53420 1690 aaPredicted RBP9.63□□□□□ -0.87
MSL3-201ENST00000312196 C5orf67F2Z3F1 127 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 SCG2P13521 617 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 IFNAR1P17181 557 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 GNA11P29992 359 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 HIC1Q14526 733 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 MBTPS1Q14703 1052 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 CEP55Q53EZ4 464 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 BLOC1S2Q6QNY1 142 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 MOXD1Q6UVY6 613 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 CYFIP1Q7L576 1253 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 DEFB128Q7Z7B8 93 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 CCDC148Q8NFR7 591 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 GPKOWQ92917 476 aaPredicted RBP eCLIP9.62□□□□□ -0.87
MSL3-201ENST00000312196 MRPL38Q96DV4 380 aaKnown RBP9.62□□□□□ -0.87
MSL3-201ENST00000312196 ZNF274Q96GC6 653 aaPredicted RBP9.62□□□□□ -0.87
MSL3-201ENST00000312196 SDF4Q9BRK5 362 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 MYL10Q9BUA6 226 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 RNPEPQ9H4A4 650 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 ZSWIM6Q9HCJ5 1215 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 C6orf50Q9HD87 102 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 PCDHA2Q9Y5H9 948 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 MKI67P46013 3256 aaKnown RBP9.62□□□□□ -0.87
MSL3-201ENST00000312196 KLF18A0A0U1RQI7 1052 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 NAPAP54920 295 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 ZNF484Q5JVG2 852 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 MICALL1Q8N3F8 863 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 DAGLBQ8NCG7 672 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 RDM1Q8NG50 284 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 RSPH1Q8WYR4 309 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 JPH1Q9HDC5 661 aaPredicted RBP9.62□□□□□ -0.87
MSL3-201ENST00000312196 TBC1D22BQ9NU19 505 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 SLC9A2Q9UBY0 812 aa9.62□□□□□ -0.87
MSL3-201ENST00000312196 SMIM35A0A1B0GVV1 85 aa9.61□□□□□ -0.87
MSL3-201ENST00000312196 FSD2A1L4K1 749 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms