RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 Skap1Q3UUV5 355 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Rsad1Q5SUV1 442 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 E330017A01RikQ8BU47 192 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Krt5Q922U2 580 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Ndst4Q9EQW8 872 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Eif2ak1Q9Z2R9 619 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Cfap70D3YVL2 1141 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Cyp3a25O09158 503 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Per2O54943 1257 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Mettl17Q3U2U7 461 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 PapolaQ61183 739 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Cpsf3Q9QXK7 684 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Twf2Q9Z0P5 349 aaKnown RBP14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Phlpp1Q8CHE4 1687 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Mcf2A2AEU1 1111 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Akap5D3YVF0 745 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 ZfaP23607 742 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Sept1P42209 366 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Hspa8P63017 646 aaKnown RBP14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 NntQ61941 1086 aaKnown RBP14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Ehd2Q8BH64 543 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Smc6Q924W5 1097 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 IcoslgQ9JHJ8 322 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Ccdc153P0C7Q1 202 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Dynlt1P51807 113 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Taf1bP97358 586 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Nr1d1Q3UV55 615 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 PigsQ6PD26 555 aaKnown RBP14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Dync1li2Q6PDL0 492 aaKnown RBP14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Trim56Q80VI1 734 aaKnown RBP14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Hip1Q8VD75 1029 aaKnown RBP14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Dynll2Q9D0M5 89 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Caln1Q9JJG7 219 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Ecel1Q9JMI0 775 aa14.32□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Lrch2Q3UMG5 773 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Kctd16Q5DTY9 427 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Efcab14Q8BGQ6 484 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Cep57Q8CEE0 500 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Arhgap18Q8K0Q5 663 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Eif3cQ8R1B4 911 aaKnown RBP14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Arl6ip4Q9JM93 229 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Aldh18a1Q9Z110 795 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Mon2Q80TL7 1715 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Clrn2B2RVW2 232 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Apol6B7ZC55 329 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Cog7Q3UM29 770 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Avpr1aQ62463 423 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Impg2Q80XH2 1243 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 RabggtaQ9JHK4 567 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Gbp6A0A0G2JDV3 611 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Vmn2r78K7N6U5 853 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Gm43302L7N1X8 611 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 CatspereP0DP43 985 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Sox5P35710 763 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Sem1P60897 70 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Fxr1Q61584 677 aaKnown RBP14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Wdr27Q8C5V5 780 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Cdk8Q8R3L8 464 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Dhx58Q99J87 678 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Utp11Q9CZJ1 253 aaKnown RBP14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Gja10Q9WUS4 505 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Kif9Q9WV04 790 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Gm13023A2A8N2 498 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Pik3r1P26450 724 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Alox15P39654 663 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Slc8a1P70414 970 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Acap3Q6NXL5 833 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Serpina3bQ8BYY9 420 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Rassf9Q8K342 435 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 CenpkQ9ESN5 271 aa14.31□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Eef2kO08796 724 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 UrgcpQ5NCI0 926 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Nab2Q61127 525 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Ces3aQ63880 571 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Nek9Q8K1R7 984 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Ces3bQ8VCU1 571 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 MlxiplQ99MZ3 864 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Myo1eE9Q634 1107 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Cfap52Q5F201 620 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 PrimpolQ6P1E7 537 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 B4galnt4Q766D5 1034 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Ccdc65Q8VHI7 493 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Rbm42Q91V81 474 aaKnown RBP14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Snx1Q9WV80 522 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Tulp1Q9Z273 543 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Zfp408H7BX78 710 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Slc3a2P10852 526 aaKnown RBP14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Stmn1P54227 149 aaKnown RBP14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Miga1Q4QQM5 600 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Mysm1Q69Z66 819 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Trim17Q7TPM3 477 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Stxbp5Q8K400 1152 aaKnown RBP14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Gga1Q8R0H9 635 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Ces1dQ8VCT4 565 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Tmod3Q9JHJ0 352 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Pus3Q9JI38 481 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Tnni1Q9WUZ5 187 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Arhgap29Q8CGF1 1266 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Fem1bQ9Z2G0 627 aa14.3□□□□□ -0.12
Rnf40-202ENSMUST00000205694 Card6E9PWH2 1175 aa14.29□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms