RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 MF(ALPHA)1P01149 165 aa-0.14□□□□□ -2.43
snR50snR50 STE7P06784 515 aa-0.14□□□□□ -2.43
snR50snR50 YER188C-AP0C0V2 99 aa-0.14□□□□□ -2.43
snR50snR50 COX13P32799 129 aa-0.14□□□□□ -2.43
snR50snR50 TFC4P33339 1025 aa-0.14□□□□□ -2.43
snR50snR50 TCD2P36101 447 aaKnown RBP-0.14□□□□□ -2.43
snR50snR50 CBP4P37267 147 aa-0.14□□□□□ -2.43
snR50snR50 ERP2P39704 215 aa-0.14□□□□□ -2.43
snR50snR50 YIL029CP40538 142 aa-0.14□□□□□ -2.43
snR50snR50 EGT2P42835 1041 aa-0.14□□□□□ -2.43
snR50snR50 AIM22P47051 409 aa-0.14□□□□□ -2.43
snR50snR50 AAD10P47182 288 aa-0.14□□□□□ -2.43
snR50snR50 YPL113CQ02961 396 aa-0.14□□□□□ -2.43
snR50snR50 YMR155WQ03795 547 aa-0.14□□□□□ -2.43
snR50snR50 MFB1Q04922 465 aa-0.14□□□□□ -2.43
snR50snR50 MRX8Q05473 314 aa-0.14□□□□□ -2.43
snR50snR50 YLR345WQ06137 509 aa-0.14□□□□□ -2.43
snR50snR50 CLP1Q08685 445 aaPredicted RBP-0.14□□□□□ -2.43
snR50snR50 YPR022CQ12139 1133 aa-0.14□□□□□ -2.43
snR50snR50 TFC7Q12415 435 aa-0.14□□□□□ -2.43
snR50snR50 PCD1Q12524 340 aa-0.14□□□□□ -2.43
snR50snR50 RPS23AP0CX29 145 aaKnown RBP-0.15□□□□□ -2.43
snR50snR50 RPS23BP0CX30 145 aa-0.15□□□□□ -2.43
snR50snR50 ASP3-2P0CX77 362 aa-0.15□□□□□ -2.43
snR50snR50 ASP3-3P0CX78 362 aa-0.15□□□□□ -2.43
snR50snR50 ASP3-4P0CX79 362 aa-0.15□□□□□ -2.43
snR50snR50 ASP3-1P0CZ17 362 aa-0.15□□□□□ -2.43
snR50snR50 YCL049CP25577 312 aa-0.15□□□□□ -2.43
snR50snR50 YEL043WP32618 956 aa-0.15□□□□□ -2.43
snR50snR50 RAD5P32849 1169 aaPredicted RBP-0.15□□□□□ -2.43
snR50snR50 ECM14P38836 430 aa-0.15□□□□□ -2.43
snR50snR50 POP1P41812 875 aa-0.15□□□□□ -2.43
snR50snR50 YFR054CP43622 192 aa-0.15□□□□□ -2.43
snR50snR50 ECM27P47144 725 aa-0.15□□□□□ -2.43
snR50snR50 MIG2P53035 382 aa-0.15□□□□□ -2.43
snR50snR50 PEX14P53112 341 aa-0.15□□□□□ -2.43
snR50snR50 BCH1Q05029 724 aa-0.15□□□□□ -2.43
snR50snR50 TFC6Q06339 672 aa-0.15□□□□□ -2.43
snR50snR50 YLL032CQ07834 825 aaKnown RBP RIP-Chip data-0.15□□□□□ -2.43not detected
snR50snR50 RLP24Q07915 199 aaKnown RBP-0.15□□□□□ -2.43
snR50snR50 RIM20Q12033 661 aa-0.15□□□□□ -2.43
snR50snR50 YGR161W-CQ3E744 92 aa-0.15□□□□□ -2.43
snR50snR50 TDH2P00358 332 aaKnown RBP-0.16□□□□□ -2.44
snR50snR50 TDH3P00359 332 aaKnown RBP RIP-Chip data-0.16□□□□□ -2.44not detected
snR50snR50 HIS4P00815 799 aaKnown RBP-0.16□□□□□ -2.44
snR50snR50 MTF2P10849 440 aa-0.16□□□□□ -2.44
snR50snR50 UBC1P21734 215 aaKnown RBP-0.16□□□□□ -2.44
snR50snR50 RSA4P25382 515 aaKnown RBP-0.16□□□□□ -2.44
snR50snR50 PEP3P27801 918 aa-0.16□□□□□ -2.44
snR50snR50 SKG6P32900 734 aaPredicted RBP-0.16□□□□□ -2.44
snR50snR50 XRS2P33301 854 aa-0.16□□□□□ -2.44
snR50snR50 RRP1P35178 278 aaPredicted RBP-0.16□□□□□ -2.44
snR50snR50 MUM2P38236 366 aa-0.16□□□□□ -2.44
snR50snR50 RRP4P38792 359 aaKnown RBP-0.16□□□□□ -2.44
snR50snR50 SBE22P38814 852 aa-0.16□□□□□ -2.44
snR50snR50 MBB1P39534 108 aa-0.16□□□□□ -2.44
snR50snR50 YMR147WP40218 223 aaKnown RBP-0.16□□□□□ -2.44
snR50snR50 PSF2P40359 213 aa-0.16□□□□□ -2.44
snR50snR50 MAM33P40513 266 aa-0.16□□□□□ -2.44
snR50snR50 HAC1P41546 238 aa-0.16□□□□□ -2.44
snR50snR50 SFH5P47008 294 aa-0.16□□□□□ -2.44
snR50snR50 PET130P47065 347 aa-0.16□□□□□ -2.44
snR50snR50 TRF5P48561 642 aaKnown RBP-0.16□□□□□ -2.44
snR50snR50 AZR1P50080 613 aa-0.16□□□□□ -2.44
snR50snR50 SHE4P51534 789 aa-0.16□□□□□ -2.44
snR50snR50 NCS2P53923 493 aaPredicted RBP-0.16□□□□□ -2.44
snR50snR50 CGI121Q03705 181 aaKnown RBP-0.16□□□□□ -2.44
snR50snR50 YMR018WQ04364 514 aa-0.16□□□□□ -2.44
snR50snR50 COQ9Q05779 260 aa-0.16□□□□□ -2.44
snR50snR50 PEX30Q06169 523 aa-0.16□□□□□ -2.44
snR50snR50 LUC7Q07508 261 aaPredicted RBP-0.16□□□□□ -2.44
snR50snR50 MFG1Q07684 458 aa-0.16□□□□□ -2.44
snR50snR50 SMC5Q08204 1093 aa-0.16□□□□□ -2.44
snR50snR50 LDB17Q12342 491 aa-0.16□□□□□ -2.44
snR50snR50 TMA17Q12513 150 aa-0.16□□□□□ -2.44
snR50snR50 YLR302CO13544 120 aa-0.17□□□□□ -2.44
snR50snR50 COR1P07256 457 aa-0.17□□□□□ -2.44
snR50snR50 ARD1P07347 238 aaPredicted RBP-0.17□□□□□ -2.44
snR50snR50 MSS18P08593 268 aa-0.17□□□□□ -2.44
snR50snR50 HPR1P17629 752 aaKnown RBP-0.17□□□□□ -2.44
snR50snR50 DBF4P32325 704 aa-0.17□□□□□ -2.44
snR50snR50 MRP20P32387 263 aa-0.17□□□□□ -2.44
snR50snR50 PHA2P32452 334 aa-0.17□□□□□ -2.44
snR50snR50 RAD23P32628 398 aaKnown RBP-0.17□□□□□ -2.44
snR50snR50 ALY1P36117 915 aa-0.17□□□□□ -2.44
snR50snR50 NRG2P38082 220 aa-0.17□□□□□ -2.44
snR50snR50 SMP1P38128 452 aa-0.17□□□□□ -2.44
snR50snR50 PAF1P38351 445 aa-0.17□□□□□ -2.44
snR50snR50 MSR1P38714 643 aa-0.17□□□□□ -2.44
snR50snR50 KEL1P38853 1164 aaKnown RBP-0.17□□□□□ -2.44
snR50snR50 LYS1P38998 373 aaRIP-Chip data-0.17□□□□□ -2.44not detected
snR50snR50 COX14P39103 70 aa-0.17□□□□□ -2.44
snR50snR50 YNL208WP40159 199 aaKnown RBP-0.17□□□□□ -2.44
snR50snR50 AIP1P46680 615 aaKnown RBP-0.17□□□□□ -2.44
snR50snR50 BUD13P46947 266 aaPredicted RBP-0.17□□□□□ -2.44
snR50snR50 AIM24P47127 394 aa-0.17□□□□□ -2.44
snR50snR50 MRM2P53123 320 aa-0.17□□□□□ -2.44
snR50snR50 FRE4P53746 719 aa-0.17□□□□□ -2.44
snR50snR50 VMS1Q04311 632 aaKnown RBP-0.17□□□□□ -2.44
snR50snR50 INM2Q05533 292 aa-0.17□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms