RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 YFR020WP43600 232 aa3.04□□□□□ -1.92
snR42snR42 PAN2P53010 1115 aaPredicted RBP3.04□□□□□ -1.92
snR42snR42 SHY1P53266 389 aa3.04□□□□□ -1.92
snR42snR42 IST1P53843 298 aaPredicted RBP3.04□□□□□ -1.92
snR42snR42 IBD2P53892 351 aa3.04□□□□□ -1.92
snR42snR42 UBX4P54730 416 aa3.04□□□□□ -1.92
snR42snR42 PRP38Q00723 242 aaPredicted RBP3.04□□□□□ -1.92
snR42snR42 MRS2Q01926 470 aa3.04□□□□□ -1.92
snR42snR42 BOP2Q06150 570 aa3.04□□□□□ -1.92
snR42snR42 TEN1Q07921 160 aa3.04□□□□□ -1.92
snR42snR42 RUD3Q12234 484 aaKnown RBP3.04□□□□□ -1.92
snR42snR42 YPL247CQ12523 523 aa3.04□□□□□ -1.92
snR42snR42 IRA1P18963 3092 aa3.04□□□□□ -1.92
snR42snR42 HFA1P32874 2273 aa3.04□□□□□ -1.92
snR42snR42 ILV2P07342 687 aaKnown RBP3.03□□□□□ -1.92
snR42snR42 SEC15P22224 910 aa3.03□□□□□ -1.92
snR42snR42 SGV1P23293 657 aaKnown RBP3.03□□□□□ -1.92
snR42snR42 SPS22P25380 463 aa3.03□□□□□ -1.92
snR42snR42 ILV6P25605 309 aaKnown RBP3.03□□□□□ -1.92
snR42snR42 ZIP1P31111 875 aa3.03□□□□□ -1.92
snR42snR42 FUN30P31380 1131 aa3.03□□□□□ -1.92
snR42snR42 PET127P32606 800 aa3.03□□□□□ -1.92
snR42snR42 CBP4P37267 147 aa3.03□□□□□ -1.92
snR42snR42 YHR112CP38716 378 aa3.03□□□□□ -1.92
snR42snR42 LIN1P38852 340 aaPredicted RBP3.03□□□□□ -1.92
snR42snR42 YIL086CP40503 102 aa3.03□□□□□ -1.92
snR42snR42 MNT3P40549 630 aa3.03□□□□□ -1.92
snR42snR42 MAD2P40958 196 aa3.03□□□□□ -1.92
snR42snR42 RPL10P41805 221 aaKnown RBP3.03□□□□□ -1.92
snR42snR42 HOC1P47124 396 aa3.03□□□□□ -1.92
snR42snR42 YPT32P51996 222 aaKnown RBP3.03□□□□□ -1.92
snR42snR42 AIF1P52923 378 aa3.03□□□□□ -1.92
snR42snR42 SDT1P53078 280 aa3.03□□□□□ -1.92
snR42snR42 YGR053CP53234 283 aa3.03□□□□□ -1.92
snR42snR42 YNL140CP53910 189 aa3.03□□□□□ -1.92
snR42snR42 LSM3P57743 89 aaKnown RBP3.03□□□□□ -1.92
snR42snR42 SLT2Q00772 484 aa3.03□□□□□ -1.92
snR42snR42 PEX25Q02969 394 aa3.03□□□□□ -1.92
snR42snR42 MET31Q03081 177 aa3.03□□□□□ -1.92
snR42snR42 USA1Q03714 838 aa3.03□□□□□ -1.92
snR42snR42 YET2Q04210 160 aa3.03□□□□□ -1.92
snR42snR42 COQ11Q05892 277 aa3.03□□□□□ -1.92
snR42snR42 STE23Q06010 1027 aa3.03□□□□□ -1.92
snR42snR42 RAD34Q06665 692 aa3.03□□□□□ -1.92
snR42snR42 YOL159CQ08300 171 aa3.03□□□□□ -1.92
snR42snR42 APC9Q12107 265 aa3.03□□□□□ -1.92
snR42snR42 YPL245WQ12179 454 aaKnown RBP3.03□□□□□ -1.92
snR42snR42 MSL5Q12186 476 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
snR42snR42 YPL066WQ12194 479 aa3.03□□□□□ -1.92
snR42snR42 AHA1Q12449 350 aaKnown RBP3.03□□□□□ -1.92
snR42snR42 COR1P07256 457 aa3.02□□□□□ -1.93
snR42snR42 CDC26P14724 124 aa3.02□□□□□ -1.93
snR42snR42 HSC82P15108 705 aaKnown RBP3.02□□□□□ -1.93
snR42snR42 MSS116P15424 664 aaKnown RBP3.02□□□□□ -1.93
snR42snR42 TRX3P25372 127 aa3.02□□□□□ -1.93
snR42snR42 ERG1P32476 496 aaKnown RBP3.02□□□□□ -1.93
snR42snR42 LYP1P32487 611 aa3.02□□□□□ -1.93
snR42snR42 CDC5P32562 705 aa3.02□□□□□ -1.93
snR42snR42 KKQ8P36004 724 aa3.02□□□□□ -1.93
snR42snR42 ASC1P38011 319 aaKnown RBP3.02□□□□□ -1.93
snR42snR42 BMT2P38278 337 aa3.02□□□□□ -1.93
snR42snR42 GGC1P38988 300 aa3.02□□□□□ -1.93
snR42snR42 MBP1P39678 833 aa3.02□□□□□ -1.93
snR42snR42 OAF1P39720 1047 aaPredicted RBP3.02□□□□□ -1.93
snR42snR42 SCS2P40075 244 aaKnown RBP3.02□□□□□ -1.93
snR42snR42 COA1P40452 197 aa3.02□□□□□ -1.93
snR42snR42 IKS1P47042 667 aa3.02□□□□□ -1.93
snR42snR42 LIA1P47120 325 aaKnown RBP3.02□□□□□ -1.93
snR42snR42 YGL260WP53056 76 aa3.02□□□□□ -1.93
snR42snR42 IMO32P53219 342 aa3.02□□□□□ -1.93
snR42snR42 GTR2P53290 341 aa3.02□□□□□ -1.93
snR42snR42 RNY1Q02933 434 aaKnown RBP3.02□□□□□ -1.93
snR42snR42 GAD1Q04792 585 aa3.02□□□□□ -1.93
snR42snR42 YOL024WQ08172 172 aa3.02□□□□□ -1.93
snR42snR42 RRP40Q08285 240 aaKnown RBP3.02□□□□□ -1.93
snR42snR42 MMT2Q08970 484 aa3.02□□□□□ -1.93
snR42snR42 YPL272CQ08984 517 aa3.02□□□□□ -1.93
snR42snR42 RUP1Q12242 671 aa3.02□□□□□ -1.93
snR42snR42 IPP1P00817 287 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 YPT1P01123 206 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 ATP4P05626 244 aa3.01□□□□□ -1.93
snR42snR42 RHO2P06781 192 aa3.01□□□□□ -1.93
snR42snR42 COS2P0CX12 379 aa3.01□□□□□ -1.93
snR42snR42 COS3P0CX13 379 aa3.01□□□□□ -1.93
snR42snR42 HOM3P10869 527 aa3.01□□□□□ -1.93
snR42snR42 SRV2P17555 526 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 MDM10P18409 493 aa3.01□□□□□ -1.93
snR42snR42 CHA1P25379 360 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 TAH1P25638 111 aaPredicted RBP3.01□□□□□ -1.93
snR42snR42 CMK1P27466 446 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 BUD14P27637 709 aa3.01□□□□□ -1.93
snR42snR42 YJU2P28320 278 aaPredicted RBP3.01□□□□□ -1.93
snR42snR42 UGP1P32861 499 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 SUI1P32911 108 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 OAF3P36023 863 aa3.01□□□□□ -1.93
snR42snR42 SEC31P38968 1273 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 FMP52P40008 231 aa3.01□□□□□ -1.93
snR42snR42 SEC27P41811 889 aaKnown RBP3.01□□□□□ -1.93
snR42snR42 FKH2P41813 862 aa3.01□□□□□ -1.93
snR42snR42 MEP2P41948 499 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms