RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C GLN4P13188 809 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C RPB4P20433 221 aaPredicted RBP4.27□□□□□ -1.73
CDC42YLR229C CLN1P20437 546 aa4.27□□□□□ -1.73
CDC42YLR229C TRX2P22803 104 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C URE2P23202 354 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C PHO91P27514 894 aa4.27□□□□□ -1.73
CDC42YLR229C BEM1P29366 551 aa4.27□□□□□ -1.73
CDC42YLR229C STE14P32584 239 aa4.27□□□□□ -1.73
CDC42YLR229C MAK5P38112 773 aaPredicted RBP4.27□□□□□ -1.73
CDC42YLR229C TDP1P38319 544 aa4.27□□□□□ -1.73
CDC42YLR229C EGD2P38879 174 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C MPT5P39016 859 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
CDC42YLR229C HAT2P39984 401 aa4.27□□□□□ -1.73
CDC42YLR229C KRE29P40026 464 aa4.27□□□□□ -1.73
CDC42YLR229C AVT6P40074 448 aa4.27□□□□□ -1.73
CDC42YLR229C MMF1P40185 145 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C BTT1P40314 149 aaPredicted RBP4.27□□□□□ -1.73
CDC42YLR229C IMA5P40884 581 aa4.27□□□□□ -1.73
CDC42YLR229C UFE1P41834 346 aa4.27□□□□□ -1.73
CDC42YLR229C YFL040WP43562 540 aa4.27□□□□□ -1.73
CDC42YLR229C MPS3P47069 682 aa4.27□□□□□ -1.73
CDC42YLR229C DIA3P52290 468 aa4.27□□□□□ -1.73
CDC42YLR229C SAP4P53036 818 aa4.27□□□□□ -1.73
CDC42YLR229C ARO8P53090 500 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C SLD3P53135 668 aa4.27□□□□□ -1.73
CDC42YLR229C SPC105P53148 917 aa4.27□□□□□ -1.73
CDC42YLR229C YNL033WP53964 284 aa4.27□□□□□ -1.73
CDC42YLR229C YNL019CP53975 284 aa4.27□□□□□ -1.73
CDC42YLR229C REX2P54964 269 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C PET117Q02771 107 aa4.27□□□□□ -1.73
CDC42YLR229C RPN9Q04062 393 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C PEX12Q04370 399 aa4.27□□□□□ -1.73
CDC42YLR229C YMR111CQ04461 462 aaPredicted RBP4.27□□□□□ -1.73
CDC42YLR229C ECM38Q05902 660 aaPredicted RBP4.27□□□□□ -1.73
CDC42YLR229C NEJ1Q06148 342 aa4.27□□□□□ -1.73
CDC42YLR229C YLR012CQ07927 99 aa4.27□□□□□ -1.73
CDC42YLR229C ENB1Q08299 606 aa4.27□□□□□ -1.73
CDC42YLR229C SGT1Q08446 395 aa4.27□□□□□ -1.73
CDC42YLR229C RCN2Q12044 265 aa4.27□□□□□ -1.73
CDC42YLR229C GLT1Q12680 2145 aaKnown RBP4.27□□□□□ -1.73
CDC42YLR229C RHO1P06780 209 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C MET3P08536 511 aa4.26□□□□□ -1.73
CDC42YLR229C NSP1P14907 823 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C STF2P16965 84 aa4.26□□□□□ -1.73
CDC42YLR229C KGD1P20967 1014 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C AAT2P23542 418 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C YSP3P25036 478 aa4.26□□□□□ -1.73
CDC42YLR229C PUP3P25451 205 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C YCR090CP25654 182 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C YBR139WP38109 508 aa4.26□□□□□ -1.73
CDC42YLR229C MSS4P38994 779 aa4.26□□□□□ -1.73
CDC42YLR229C RBG1P39729 369 aa4.26□□□□□ -1.73
CDC42YLR229C AST2P39945 430 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C YER137CP40083 148 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C DDI1P40087 428 aa4.26□□□□□ -1.73
CDC42YLR229C RGI2P40188 164 aa4.26□□□□□ -1.73
CDC42YLR229C PRM2P40534 656 aa4.26□□□□□ -1.73
CDC42YLR229C COS4P43542 379 aa4.26□□□□□ -1.73
CDC42YLR229C BUD13P46947 266 aaPredicted RBP4.26□□□□□ -1.73
CDC42YLR229C TOM22P49334 152 aa4.26□□□□□ -1.73
CDC42YLR229C ATP22P50273 684 aaPredicted RBP4.26□□□□□ -1.73
CDC42YLR229C AIF1P52923 378 aa4.26□□□□□ -1.73
CDC42YLR229C TWF1P53250 332 aa4.26□□□□□ -1.73
CDC42YLR229C RBG2P53295 368 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C COQ6P53318 479 aa4.26□□□□□ -1.73
CDC42YLR229C LSM3P57743 89 aaKnown RBP4.26□□□□□ -1.73
CDC42YLR229C REG1Q00816 1014 aa4.26□□□□□ -1.73
CDC42YLR229C ECM9Q02202 377 aa4.26□□□□□ -1.73
CDC42YLR229C PNG1Q02890 363 aa4.26□□□□□ -1.73
CDC42YLR229C NRG1Q03125 231 aa4.26□□□□□ -1.73
CDC42YLR229C NHP10Q03435 203 aa4.26□□□□□ -1.73
CDC42YLR229C CRN1Q06440 651 aa4.26□□□□□ -1.73
CDC42YLR229C UAF30Q08747 228 aa4.26□□□□□ -1.73
CDC42YLR229C BAG7Q12128 409 aa4.26□□□□□ -1.73
CDC42YLR229C ATP16Q12165 160 aa4.26□□□□□ -1.73
CDC42YLR229C MDY2Q12285 212 aa4.26□□□□□ -1.73
CDC42YLR229C RMD5Q12508 421 aa4.26□□□□□ -1.73
CDC42YLR229C YOL159C-AQ3E769 90 aa4.26□□□□□ -1.73
CDC42YLR229C MHF1Q3E835 90 aa4.26□□□□□ -1.73
CDC42YLR229C YLR415CO13578 112 aa4.25□□□□□ -1.73
CDC42YLR229C HEM2P05373 342 aa4.25□□□□□ -1.73
CDC42YLR229C COS2P0CX12 379 aa4.25□□□□□ -1.73
CDC42YLR229C COS3P0CX13 379 aa4.25□□□□□ -1.73
CDC42YLR229C ABF1P14164 731 aa4.25□□□□□ -1.73
CDC42YLR229C CCA1P21269 546 aa4.25□□□□□ -1.73
CDC42YLR229C DBF2P22204 572 aa4.25□□□□□ -1.73
CDC42YLR229C PDE1P22434 369 aa4.25□□□□□ -1.73
CDC42YLR229C MIH1P23748 554 aa4.25□□□□□ -1.73
CDC42YLR229C CTR86P25355 563 aa4.25□□□□□ -1.73
CDC42YLR229C DCC1P25559 380 aa4.25□□□□□ -1.73
CDC42YLR229C SAC1P32368 623 aaKnown RBP4.25□□□□□ -1.73
CDC42YLR229C COX13P32799 129 aa4.25□□□□□ -1.73
CDC42YLR229C IMP3P32899 183 aaPredicted RBP4.25□□□□□ -1.73
CDC42YLR229C SGE1P33335 543 aa4.25□□□□□ -1.73
CDC42YLR229C LST4P34239 828 aa4.25□□□□□ -1.73
CDC42YLR229C CTF13P35203 478 aa4.25□□□□□ -1.73
CDC42YLR229C SKG1P36169 355 aa4.25□□□□□ -1.73
CDC42YLR229C MRPL40P36534 297 aa4.25□□□□□ -1.73
CDC42YLR229C NAT2P37293 288 aa4.25□□□□□ -1.73
CDC42YLR229C APM3P38153 483 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms