RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W ERG6P25087 383 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W SCJ1P25303 377 aa6.51□□□□□ -1.37
NMD5YJR132W MNS1P32906 549 aa6.51□□□□□ -1.37
NMD5YJR132W AFG3P39925 761 aa6.51□□□□□ -1.37
NMD5YJR132W OPT1P40897 799 aa6.51□□□□□ -1.37
NMD5YJR132W ALG11P53954 548 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W EBS1Q03466 884 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W YLR283WQ05867 314 aa6.51□□□□□ -1.37
NMD5YJR132W CRT10Q08226 957 aa6.51□□□□□ -1.37
NMD5YJR132W FRS2P15625 503 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W RNR3P21672 869 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W CPR2P23285 205 aa6.51□□□□□ -1.37
NMD5YJR132W PEP3P27801 918 aa6.51□□□□□ -1.37
NMD5YJR132W SIP2P34164 415 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W CCT4P39078 528 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W CDC40P40968 455 aaPredicted RBP6.51□□□□□ -1.37
NMD5YJR132W ATG23Q06671 453 aa6.51□□□□□ -1.37
NMD5YJR132W YNG1Q08465 219 aa6.51□□□□□ -1.37
NMD5YJR132W LYS21Q12122 440 aaKnown RBP6.51□□□□□ -1.37
NMD5YJR132W CDC33P07260 213 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W ZWF1P11412 505 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W CAF20P12962 161 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W GAL3P13045 520 aa6.5□□□□□ -1.37
NMD5YJR132W MIR1P23641 311 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W SAC1P32368 623 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W SER1P33330 395 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W YMR147WP40218 223 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W INP51P40559 946 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W GTT1P40582 234 aa6.5□□□□□ -1.37
NMD5YJR132W ACS2P52910 683 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W YNL143CP53908 130 aa6.5□□□□□ -1.37
NMD5YJR132W CSN9Q03981 162 aa6.5□□□□□ -1.37
NMD5YJR132W CSM3Q04659 317 aa6.5□□□□□ -1.37
NMD5YJR132W HRK1Q08732 759 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W YOR022CQ12204 715 aa6.5□□□□□ -1.37
NMD5YJR132W RRP42Q12277 265 aaPredicted RBP6.5□□□□□ -1.37
NMD5YJR132W CSM1P25651 190 aa6.5□□□□□ -1.37
NMD5YJR132W PCL2P25693 308 aa6.5□□□□□ -1.37
NMD5YJR132W RAD14P28519 371 aa6.5□□□□□ -1.37
NMD5YJR132W HRR25P29295 494 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W PYC2P32327 1180 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W IMP3P32899 183 aaPredicted RBP6.5□□□□□ -1.37
NMD5YJR132W LDH1P38139 375 aa6.5□□□□□ -1.37
NMD5YJR132W THI2P38141 450 aa6.5□□□□□ -1.37
NMD5YJR132W RPL6AQ02326 176 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W UTP6Q02354 440 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W APC9Q12107 265 aa6.5□□□□□ -1.37
NMD5YJR132W AFI1Q99222 893 aa6.5□□□□□ -1.37
NMD5YJR132W HTB1P02293 131 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W HTB2P02294 131 aa6.5□□□□□ -1.37
NMD5YJR132W ECM25P32525 599 aa6.5□□□□□ -1.37
NMD5YJR132W DOA1P36037 715 aa6.5□□□□□ -1.37
NMD5YJR132W VBA5P36172 582 aa6.5□□□□□ -1.37
NMD5YJR132W SHE3P38272 425 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W HRB1P38922 454 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
NMD5YJR132W AZR1P50080 613 aa6.5□□□□□ -1.37
NMD5YJR132W SKO1Q02100 647 aa6.5□□□□□ -1.37
NMD5YJR132W MYO5Q04439 1219 aaKnown RBP6.5□□□□□ -1.37
NMD5YJR132W PEX15Q08215 383 aa6.5□□□□□ -1.37
NMD5YJR132W YOR223WQ12015 292 aa6.5□□□□□ -1.37
NMD5YJR132W DCS2Q12123 353 aa6.5□□□□□ -1.37
NMD5YJR132W NSL1Q12143 216 aa6.5□□□□□ -1.37
NMD5YJR132W YDR061WQ12298 539 aa6.5□□□□□ -1.37
NMD5YJR132W YOP1Q12402 180 aa6.5□□□□□ -1.37
NMD5YJR132W MRP1P10662 321 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W CHA1P25379 360 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W BDF1P35817 686 aa6.49□□□□□ -1.37
NMD5YJR132W JEN1P36035 616 aa6.49□□□□□ -1.37
NMD5YJR132W FMP23P38231 175 aa6.49□□□□□ -1.37
NMD5YJR132W BIG1P38813 335 aa6.49□□□□□ -1.37
NMD5YJR132W MRPL13Q02204 264 aa6.49□□□□□ -1.37
NMD5YJR132W DYN2Q02647 92 aa6.49□□□□□ -1.37
NMD5YJR132W MTG1Q03151 367 aaPredicted RBP6.49□□□□□ -1.37
NMD5YJR132W SNO4Q04902 237 aa6.49□□□□□ -1.37
NMD5YJR132W HSP33Q08914 237 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W HSP32Q08992 237 aa6.49□□□□□ -1.37
NMD5YJR132W YLR108CQ12259 485 aa6.49□□□□□ -1.37
NMD5YJR132W PTC5Q12511 572 aa6.49□□□□□ -1.37
NMD5YJR132W SAC7P17121 654 aa6.49□□□□□ -1.37
NMD5YJR132W PRE9P23638 258 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W CLB2P24869 491 aa6.49□□□□□ -1.37
NMD5YJR132W UBC8P28263 218 aa6.49□□□□□ -1.37
NMD5YJR132W CAP1P28495 268 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W CKB2P38930 258 aa6.49□□□□□ -1.37
NMD5YJR132W PRP39P39682 629 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W GZF3P42944 551 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W FMP32P43557 207 aa6.49□□□□□ -1.37
NMD5YJR132W HIT1P46973 164 aa6.49□□□□□ -1.37
NMD5YJR132W YJR149WP47177 404 aa6.49□□□□□ -1.37
NMD5YJR132W ORC5P50874 479 aa6.49□□□□□ -1.37
NMD5YJR132W YMR226CQ05016 267 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W BUR2Q05949 395 aa6.49□□□□□ -1.37
NMD5YJR132W ZEO1Q08245 113 aa6.49□□□□□ -1.37
NMD5YJR132W YRA1Q12159 226 aaKnown RBP6.49□□□□□ -1.37
NMD5YJR132W RFA1P22336 621 aaKnown RBP6.48□□□□□ -1.37
NMD5YJR132W PRO3P32263 286 aaKnown RBP6.48□□□□□ -1.37
NMD5YJR132W MVD1P32377 396 aaKnown RBP6.48□□□□□ -1.37
NMD5YJR132W RPT3P33298 428 aaKnown RBP6.48□□□□□ -1.37
NMD5YJR132W TCD2P36101 447 aaKnown RBP6.48□□□□□ -1.37
NMD5YJR132W GPB2P39717 880 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms