RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C VPS62P53285 467 aa1.95□□□□□ -2.1
RTT101YJL047C IST1P53843 298 aaPredicted RBP1.95□□□□□ -2.1
RTT101YJL047C YNL260CP53846 198 aa1.95□□□□□ -2.1
RTT101YJL047C YNL146WP53906 100 aa1.95□□□□□ -2.1
RTT101YJL047C BET4Q00618 327 aa1.95□□□□□ -2.1
RTT101YJL047C YMR310CQ04867 317 aaPredicted RBP1.95□□□□□ -2.1
RTT101YJL047C TIP41Q12199 356 aa1.95□□□□□ -2.1
RTT101YJL047C PRP46Q12417 451 aaPredicted RBP1.95□□□□□ -2.1
RTT101YJL047C RMD5Q12508 421 aa1.95□□□□□ -2.1
RTT101YJL047C RAV1P47104 1357 aa1.95□□□□□ -2.1
RTT101YJL047C CHO2P05374 869 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C ADE5,7P07244 802 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C GDH1P07262 454 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C CHS1P08004 1131 aa1.94□□□□□ -2.1
RTT101YJL047C RPL18AP0CX49 186 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C RPL18BP0CX50 186 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C RPS16AP0CX51 143 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C RPS16BP0CX52 143 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C SAR1P20606 190 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C MSS51P32335 436 aa1.94□□□□□ -2.1
RTT101YJL047C ECM25P32525 599 aa1.94□□□□□ -2.1
RTT101YJL047C MTR2P34232 184 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C RPF2P36160 344 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C MAL32P38158 584 aa1.94□□□□□ -2.1
RTT101YJL047C MMS21P38632 267 aa1.94□□□□□ -2.1
RTT101YJL047C ARP1P38696 384 aa1.94□□□□□ -2.1
RTT101YJL047C UBA4P38820 440 aa1.94□□□□□ -2.1
RTT101YJL047C CIN4P39110 191 aa1.94□□□□□ -2.1
RTT101YJL047C PRM9P39551 298 aa1.94□□□□□ -2.1
RTT101YJL047C DSE1P40077 573 aa1.94□□□□□ -2.1
RTT101YJL047C YIR042CP40586 236 aa1.94□□□□□ -2.1
RTT101YJL047C YDL186WP48568 277 aa1.94□□□□□ -2.1
RTT101YJL047C MAL12P53341 584 aa1.94□□□□□ -2.1
RTT101YJL047C DIP5P53388 608 aa1.94□□□□□ -2.1
RTT101YJL047C ESBP6P53918 673 aa1.94□□□□□ -2.1
RTT101YJL047C RSM23Q01163 450 aa1.94□□□□□ -2.1
RTT101YJL047C SHR3Q02774 210 aa1.94□□□□□ -2.1
RTT101YJL047C MUK1Q02866 612 aa1.94□□□□□ -2.1
RTT101YJL047C YMR087WQ04299 284 aa1.94□□□□□ -2.1
RTT101YJL047C FUS2Q05670 677 aa1.94□□□□□ -2.1
RTT101YJL047C SNT309Q06091 175 aaPredicted RBP1.94□□□□□ -2.1
RTT101YJL047C YDL057WQ07379 328 aa1.94□□□□□ -2.1
RTT101YJL047C PEX27Q08580 376 aa1.94□□□□□ -2.1
RTT101YJL047C IRC13Q08630 104 aa1.94□□□□□ -2.1
RTT101YJL047C BTS1Q12051 335 aa1.94□□□□□ -2.1
RTT101YJL047C YPR022CQ12139 1133 aa1.94□□□□□ -2.1
RTT101YJL047C YDR262WQ12331 272 aa1.94□□□□□ -2.1
RTT101YJL047C ADH2P00331 348 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C COX2P00410 251 aa1.94□□□□□ -2.1
RTT101YJL047C SCEIP03882 235 aa1.94□□□□□ -2.1
RTT101YJL047C RPL24AP04449 155 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C OPI3P05375 206 aa1.94□□□□□ -2.1
RTT101YJL047C YMR085WP0CF18 432 aa1.94□□□□□ -2.1
RTT101YJL047C CDC23P16522 626 aa1.94□□□□□ -2.1
RTT101YJL047C MET16P18408 261 aaPredicted RBP1.94□□□□□ -2.1
RTT101YJL047C STE4P18851 423 aa1.94□□□□□ -2.1
RTT101YJL047C CKA2P19454 339 aa1.94□□□□□ -2.1
RTT101YJL047C SPE2P21182 396 aa1.94□□□□□ -2.1
RTT101YJL047C RPS5P26783 225 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C ZIP1P31111 875 aa1.94□□□□□ -2.1
RTT101YJL047C RPC25P35718 212 aa1.94□□□□□ -2.1
RTT101YJL047C MRPL10P36520 322 aa1.94□□□□□ -2.1
RTT101YJL047C KAP104P38217 918 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C OLA1P38219 394 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C RTC2P38279 296 aa1.94□□□□□ -2.1
RTT101YJL047C EFM2P38347 419 aa1.94□□□□□ -2.1
RTT101YJL047C SPC97P38863 823 aa1.94□□□□□ -2.1
RTT101YJL047C CCT2P39076 527 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C YEL020CP39994 560 aa1.94□□□□□ -2.1
RTT101YJL047C PHM8P40025 321 aa1.94□□□□□ -2.1
RTT101YJL047C GAT2P40209 560 aa1.94□□□□□ -2.1
RTT101YJL047C HXT9P40885 567 aa1.94□□□□□ -2.1
RTT101YJL047C YAR1P46683 200 aa1.94□□□□□ -2.1
RTT101YJL047C STE24P47154 453 aa1.94□□□□□ -2.1
RTT101YJL047C STB4P50104 949 aa1.94□□□□□ -2.1
RTT101YJL047C UBC11P52492 156 aa1.94□□□□□ -2.1
RTT101YJL047C ERG26P53199 349 aaKnown RBP1.94□□□□□ -2.1
RTT101YJL047C NMA2P53204 395 aa1.94□□□□□ -2.1
RTT101YJL047C YGR035CP53222 116 aa1.94□□□□□ -2.1
RTT101YJL047C MRPL22P53881 309 aa1.94□□□□□ -2.1
RTT101YJL047C NOP13P53883 403 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
RTT101YJL047C HXT11P54862 567 aa1.94□□□□□ -2.1
RTT101YJL047C RPM2Q02773 1202 aa1.94□□□□□ -2.1
RTT101YJL047C TRS23Q03784 219 aa1.94□□□□□ -2.1
RTT101YJL047C DNL4Q08387 944 aaPredicted RBP1.94□□□□□ -2.1
RTT101YJL047C GET4Q12125 312 aa1.94□□□□□ -2.1
RTT101YJL047C USV1Q12132 391 aa1.94□□□□□ -2.1
RTT101YJL047C YDL177CQ12257 170 aa1.94□□□□□ -2.1
RTT101YJL047C RNH203Q12338 110 aa1.94□□□□□ -2.1
RTT101YJL047C LAG2Q92325 660 aa1.94□□□□□ -2.1
RTT101YJL047C UBA3Q99344 299 aa1.94□□□□□ -2.1
RTT101YJL047C RHO1P06780 209 aaKnown RBP1.93□□□□□ -2.1
RTT101YJL047C RHO2P06781 192 aa1.93□□□□□ -2.1
RTT101YJL047C FRS2P15625 503 aaKnown RBP1.93□□□□□ -2.1
RTT101YJL047C DBR1P24309 405 aaKnown RBP1.93□□□□□ -2.1
RTT101YJL047C CIN8P27895 1000 aa1.93□□□□□ -2.1
RTT101YJL047C ATP11P32453 318 aa1.93□□□□□ -2.1
RTT101YJL047C RGT1P32862 1170 aa1.93□□□□□ -2.1
RTT101YJL047C PTR2P32901 601 aa1.93□□□□□ -2.1
RTT101YJL047C YKL162CP36052 402 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 6.4 ms