RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	YJL163C	P46996	555 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	PET117	Q02771	107 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	PLM2	Q04383	521 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	URC2	Q04411	772 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	NUP192	P47054	1683 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	THR4	P16120	514 aa	Known RBP	4.83	□□□□□ -1.64
UBP7	YIL156W	RME1	P32338	300 aa	Known RBP	4.83	□□□□□ -1.64
UBP7	YIL156W	ATM1	P40416	690 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	MSS2	P40990	351 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	RSM23	Q01163	450 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	YDR215C	Q12240	137 aa		4.83	□□□□□ -1.64
UBP7	YIL156W	TRP4	P07285	380 aa	Predicted RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	ADY2	P25613	283 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	MGM101	P32787	269 aa	Known RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	RPC37	P36121	282 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	TAE1	P38340	232 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	RPS10B	P46784	105 aa	Known RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	BIO3	P50277	480 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	YDL057W	Q07379	328 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	GEP3	Q08622	556 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	FMP16	Q12497	93 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	CFT1	Q06632	1357 aa	Known RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	NFT1	P0CE68	1218 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	HXT2	P23585	541 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	ERG1	P32476	496 aa	Known RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	YSC83	P32792	385 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	PRS1	P32895	427 aa	Known RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	SIP3	P38717	1229 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	YHR045W	P38775	560 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	SPC97	P38863	823 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	MRK1	P50873	501 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	APC4	Q04601	652 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	YMR310C	Q04867	317 aa	Predicted RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	ENB1	Q08299	606 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	ZPS1	Q12512	249 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	ADE4	P04046	510 aa	Known RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	SPR1	P32603	445 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	GMH1	P36125	273 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	ALP1	P38971	573 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	FMP52	P40008	231 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	HOP2	P53187	214 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	YNL146W	P53906	100 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	RRN11	Q04712	507 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	SSQ1	Q05931	657 aa	Predicted RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	ARO10	Q06408	635 aa		4.82	□□□□□ -1.64
UBP7	YIL156W	DIB1	Q06819	143 aa	Predicted RBP	4.82	□□□□□ -1.64
UBP7	YIL156W	CYC7	P00045	113 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	SCEI	P03882	235 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	PEP4	P07267	405 aa	Known RBP	4.81	□□□□□ -1.64
UBP7	YIL156W	SEC63	P14906	663 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	SAR1	P20606	190 aa	Known RBP	4.81	□□□□□ -1.64
UBP7	YIL156W	RNR3	P21672	869 aa	Known RBP	4.81	□□□□□ -1.64
UBP7	YIL156W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
UBP7	YIL156W	RPC34	P32910	317 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	BMH2	P34730	273 aa	Known RBP	4.81	□□□□□ -1.64
UBP7	YIL156W	QDR3	P38227	689 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	EFM2	P38347	419 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	RCY1	P39531	840 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	PGA2	P53903	129 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	ADE5,7	P07244	802 aa	Known RBP	4.81	□□□□□ -1.64
UBP7	YIL156W	ATP10	P18496	279 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	ARO4	P32449	370 aa	Known RBP	4.81	□□□□□ -1.64
UBP7	YIL156W	YHR177W	P38867	453 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	TOS3	P43637	560 aa		4.81	□□□□□ -1.64
UBP7	YIL156W	NCE102	Q12207	173 aa	RIP-Chip data	4.81	□□□□□ -1.64	not detected
UBP7	YIL156W	LAM4	P38800	1345 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	CHO1	P08456	276 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	MAS1	P10507	462 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	CNA1	P23287	553 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	HSP104	P31539	908 aa	Known RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	YPS1	P32329	569 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	RAD23	P32628	398 aa	Known RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	EMP70	P32802	667 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	BUD2	P33314	1104 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
UBP7	YIL156W	YER085C	P40058	173 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	SHQ1	P40486	507 aa	Predicted RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	YMR178W	Q03219	274 aa	Known RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	MRPL35	Q06678	367 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	PEX27	Q08580	376 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	PKH2	Q12236	1081 aa	Known RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	AHC1	Q12433	566 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	PEP5	P12868	1029 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	YUR1	P26725	428 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	MTR2	P34232	184 aa	Known RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	KAE1	P36132	386 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	RRN10	P38204	145 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	YDR132C	Q03900	495 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	THP1	Q08231	455 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	NRT1	Q08485	598 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	YDL176W	Q12027	708 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	RRP5	Q05022	1729 aa	Known RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	PTC6	P25646	442 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	FRE1	P32791	686 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	TFG2	P41896	400 aa	Predicted RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	YFL066C	P43538	392 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	AAT1	Q01802	451 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	MRPS17	Q03246	237 aa	Predicted RBP	4.8	□□□□□ -1.64
UBP7	YIL156W	HRD3	Q05787	833 aa		4.8	□□□□□ -1.64
UBP7	YIL156W	NSE1	Q07913	336 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms