RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C STP1Q00947 519 aa3.43□□□□□ -1.86
SSM4YIL030C RLI1Q03195 608 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C DBP9Q06218 594 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C VPS74Q06385 345 aa3.43□□□□□ -1.86
SSM4YIL030C YPR091CQ06833 770 aa3.43□□□□□ -1.86
SSM4YIL030C SET6Q12529 373 aa3.43□□□□□ -1.86
SSM4YIL030C RRP12Q12754 1228 aaKnown RBP3.43□□□□□ -1.86
SSM4YIL030C VPS33P20795 691 aa3.42□□□□□ -1.86
SSM4YIL030C EPT1P22140 391 aa3.42□□□□□ -1.86
SSM4YIL030C AFT1P22149 690 aa3.42□□□□□ -1.86
SSM4YIL030C RPS1BP23248 255 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C PRP28P23394 588 aa3.42□□□□□ -1.86
SSM4YIL030C FPS1P23900 669 aa3.42□□□□□ -1.86
SSM4YIL030C NPL6P32832 435 aa3.42□□□□□ -1.86
SSM4YIL030C SMY2P32909 740 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C TIP20P33891 701 aa3.42□□□□□ -1.86
SSM4YIL030C DOA1P36037 715 aa3.42□□□□□ -1.86
SSM4YIL030C MRPL37P36532 105 aa3.42□□□□□ -1.86
SSM4YIL030C FAR7P43592 221 aa3.42□□□□□ -1.86
SSM4YIL030C SCD6P45978 349 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86 RIP-Chip
SSM4YIL030C CAF120P53836 1060 aa3.42□□□□□ -1.86
SSM4YIL030C LSM7P53905 115 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C DOS2P54858 310 aa3.42□□□□□ -1.86
SSM4YIL030C AIM36Q03798 255 aa3.42□□□□□ -1.86
SSM4YIL030C HBT1Q07653 1046 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C SGT1Q08446 395 aa3.42□□□□□ -1.86
SSM4YIL030C DIN7Q12086 430 aa3.42□□□□□ -1.86
SSM4YIL030C PKH2Q12236 1081 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C ZPS1Q12512 249 aa3.42□□□□□ -1.86
SSM4YIL030C ADE5,7P07244 802 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C SPS1P08458 490 aa3.42□□□□□ -1.86
SSM4YIL030C SPS2P08459 502 aa3.42□□□□□ -1.86
SSM4YIL030C PUP3P25451 205 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C SIP1P32578 815 aa3.42□□□□□ -1.86
SSM4YIL030C SSE2P32590 693 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C ECM15P35195 104 aa3.42□□□□□ -1.86
SSM4YIL030C MAP2P38174 421 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C YEL028WP39989 153 aa3.42□□□□□ -1.86
SSM4YIL030C YER034WP40022 185 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C MGS1P40151 587 aa3.42□□□□□ -1.86
SSM4YIL030C YFR020WP43600 232 aa3.42□□□□□ -1.86
SSM4YIL030C SPC19Q03954 165 aa3.42□□□□□ -1.86
SSM4YIL030C PUS5Q06244 254 aa3.42□□□□□ -1.86
SSM4YIL030C UPC2Q12151 913 aa3.42□□□□□ -1.86
SSM4YIL030C JIP3O13555 125 aa3.42□□□□□ -1.86
SSM4YIL030C MRP2P10663 115 aaPredicted RBP3.42□□□□□ -1.86
SSM4YIL030C MSM1P22438 575 aa3.42□□□□□ -1.86
SSM4YIL030C VAC17P25591 423 aa3.42□□□□□ -1.86
SSM4YIL030C LDS1P31379 325 aa3.42□□□□□ -1.86
SSM4YIL030C SSO1P32867 290 aa3.42□□□□□ -1.86
SSM4YIL030C GLG1P36143 616 aa3.42□□□□□ -1.86
SSM4YIL030C YHL026CP38740 315 aa3.42□□□□□ -1.86
SSM4YIL030C SWD1P39706 426 aa3.42□□□□□ -1.86
SSM4YIL030C CWC24P53769 259 aa3.42□□□□□ -1.86
SSM4YIL030C IDP3P53982 420 aaKnown RBP3.42□□□□□ -1.86
SSM4YIL030C KTR6P54070 446 aa3.42□□□□□ -1.86
SSM4YIL030C HLR1Q04429 423 aa3.42□□□□□ -1.86
SSM4YIL030C BCH1Q05029 724 aa3.42□□□□□ -1.86
SSM4YIL030C FUM1P08417 488 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C RPL4AP10664 362 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C CPR4P25334 318 aa3.41□□□□□ -1.86
SSM4YIL030C MRPL7P36519 292 aa3.41□□□□□ -1.86
SSM4YIL030C COS111P38308 924 aa3.41□□□□□ -1.86
SSM4YIL030C EAF5P39995 279 aa3.41□□□□□ -1.86
SSM4YIL030C PKP1P40530 394 aa3.41□□□□□ -1.86
SSM4YIL030C AIM22P47051 409 aa3.41□□□□□ -1.86
SSM4YIL030C RPL4BP49626 362 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C MON1P53129 644 aa3.41□□□□□ -1.86
SSM4YIL030C YAF9P53930 226 aa3.41□□□□□ -1.86
SSM4YIL030C MTD1Q02046 320 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C EST3Q03096 181 aa3.41□□□□□ -1.86
SSM4YIL030C YLR173WQ06247 608 aa3.41□□□□□ -1.86
SSM4YIL030C YPD1Q07688 167 aa3.41□□□□□ -1.86
SSM4YIL030C CDC31P06704 161 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C YMC1P32331 307 aa3.41□□□□□ -1.86
SSM4YIL030C DHR2P36009 735 aaPredicted RBP3.41□□□□□ -1.86
SSM4YIL030C VID24P38263 362 aa3.41□□□□□ -1.86
SSM4YIL030C ERV15P38312 142 aa3.41□□□□□ -1.86
SSM4YIL030C GTT1P40582 234 aa3.41□□□□□ -1.86
SSM4YIL030C ERG10P41338 398 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C PMT6P42934 759 aa3.41□□□□□ -1.86
SSM4YIL030C LSM1P47017 172 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C ERV29P53337 310 aa3.41□□□□□ -1.86
SSM4YIL030C RPN6Q12377 434 aa3.41□□□□□ -1.86
SSM4YIL030C RPC40P07703 335 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C REV1P12689 985 aa3.41□□□□□ -1.86
SSM4YIL030C UTR1P21373 530 aa3.41□□□□□ -1.86
SSM4YIL030C CMK1P27466 446 aaKnown RBP3.41□□□□□ -1.86
SSM4YIL030C HEM3P28789 327 aa3.41□□□□□ -1.86
SSM4YIL030C ECT1P33412 323 aa3.41□□□□□ -1.86
SSM4YIL030C FLR1P38124 548 aa3.41□□□□□ -1.86
SSM4YIL030C YBL029WP38201 376 aa3.41□□□□□ -1.86
SSM4YIL030C SDH8P38345 138 aa3.41□□□□□ -1.86
SSM4YIL030C MSS4P38994 779 aa3.41□□□□□ -1.86
SSM4YIL030C YAR028WP39548 234 aa3.41□□□□□ -1.86
SSM4YIL030C OPT1P40897 799 aa3.41□□□□□ -1.86
SSM4YIL030C ALB1P47019 175 aaPredicted RBP3.41□□□□□ -1.86
SSM4YIL030C EAF6P47128 113 aa3.41□□□□□ -1.86
SSM4YIL030C COS10P52924 374 aa3.41□□□□□ -1.86
SSM4YIL030C BIO5P53744 561 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms