RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	SSU1	P41930	458 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	PAM16	P42949	149 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	YFR018C	P43599	363 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	YJL016W	P47072	561 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	EMI1	Q04406	187 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	SSL1	Q04673	461 aa	Predicted RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	VID22	Q05934	901 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	SSK1	Q07084	712 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	GPM2	Q12008	311 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	ERP3	Q12403	225 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	HXK2	P04807	486 aa	Known RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	RPP1A	P05318	106 aa	Predicted RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	CDC23	P16522	626 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	SNC1	P31109	117 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	DPH2	P32461	534 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	MSS1	P32559	526 aa	Predicted RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	VPH1	P32563	840 aa	Known RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	MRPL3	P36516	390 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	ECM31	P38122	312 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	YER184C	P39961	794 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	PCL6	P40038	420 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	UTP7	P40055	554 aa	Known RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	VRG4	P40107	337 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	ALG8	P40351	577 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	PAN6	P40459	309 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	JHD2	P47156	728 aa	Predicted RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	IDP3	P53982	420 aa	Known RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	RRN5	Q02983	363 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	RSM28	Q03430	361 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	TRM82	Q03774	444 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	ARV1	Q06541	321 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	CRT10	Q08226	957 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	RKM5	Q12367	367 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	AHA1	Q12449	350 aa	Known RBP	4.08	□□□□□ -1.76
PMC1	YGL006W	CTF3	Q12748	733 aa		4.08	□□□□□ -1.76
PMC1	YGL006W	RPC40	P07703	335 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	NAR1	P23503	491 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	YCL049C	P25577	312 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	MRPL6	P32904	214 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	TUL1	P36096	758 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	APE3	P37302	537 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	YBR053C	P38235	358 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	RCK1	P38622	512 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	SFB3	P38810	929 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	PLB1	P39105	664 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	RCY1	P39531	840 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	YJL171C	P46992	396 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	PYK2	P52489	506 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	ARO8	P53090	500 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	COS1	P53822	381 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	YDR109C	Q04585	715 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	BLS1	Q06071	122 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	VPS74	Q06385	345 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	ATP14	Q12349	124 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	ARO3	P14843	370 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	RPS1B	P23248	255 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	AAT2	P23542	418 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	HOM6	P31116	359 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	NTH1	P32356	751 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	RPS1A	P33442	255 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	ALG3	P38179	458 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	RRG9	P40156	214 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	RFC4	P40339	323 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	FET4	P40988	552 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	APS3	P47064	194 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	YJR124C	P47159	448 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	OCA1	P50946	238 aa	Predicted RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	SCY1	P53009	804 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	TIM44	Q01852	431 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	GIP3	Q03016	1276 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	GAD1	Q04792	585 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	LDB18	Q07887	179 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	YLR036C	Q07986	203 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	SCP1	Q08873	200 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	MLH3	Q12083	715 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	LCB4	Q12246	624 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	YOR214C	Q12282	236 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	YOS9	Q99220	542 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	YEL009C-A	A0A023PZF2	135 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	PRI2	P20457	528 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	YUR1	P26725	428 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	PHO91	P27514	894 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	GLN1	P32288	370 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	THI4	P32318	326 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	SKN1	P33336	771 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	HIS7	P33734	552 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	ADD66	P36040	267 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	CDS1	P38221	457 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	PZF1	P39933	429 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	CHA4	P43634	648 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	MCM22	P47167	239 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	ARH1	P48360	493 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	GTF1	P53260	183 aa	Predicted RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	TRM112	P53738	135 aa	Predicted RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	LSM7	P53905	115 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	TPS1	Q00764	495 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	NUP100	Q02629	959 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	VHS1	Q03785	461 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	GSF2	Q04697	403 aa	Known RBP	4.07	□□□□□ -1.76
PMC1	YGL006W	YLR346C	Q06139	101 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms