RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W YBR137WP38276 179 aa2.93□□□□□ -1.94
LOC1YFR001W PTH1P38876 190 aaKnown RBP2.93□□□□□ -1.94
LOC1YFR001W NOC2P39744 710 aaKnown RBP2.93□□□□□ -1.94
LOC1YFR001W PRM5P40476 318 aa2.93□□□□□ -1.94
LOC1YFR001W NCA3P46955 337 aa2.93□□□□□ -1.94
LOC1YFR001W HMS2P47175 358 aa2.93□□□□□ -1.94
LOC1YFR001W SKO1Q02100 647 aa2.93□□□□□ -1.94
LOC1YFR001W SGT1Q08446 395 aa2.93□□□□□ -1.94
LOC1YFR001W RMD5Q12508 421 aa2.93□□□□□ -1.94
LOC1YFR001W SUP35P05453 685 aaKnown RBP2.92□□□□□ -1.94
LOC1YFR001W ILV5P06168 395 aaKnown RBP2.92□□□□□ -1.94
LOC1YFR001W SRV2P17555 526 aaKnown RBP2.92□□□□□ -1.94
LOC1YFR001W CTR86P25355 563 aa2.92□□□□□ -1.94
LOC1YFR001W LSB5P25369 354 aa2.92□□□□□ -1.94
LOC1YFR001W LDB16P25587 256 aa2.92□□□□□ -1.94
LOC1YFR001W YEL045CP32616 141 aa2.92□□□□□ -1.94
LOC1YFR001W SOR1P35497 357 aaKnown RBP2.92□□□□□ -1.94
LOC1YFR001W MTC6P38849 526 aa2.92□□□□□ -1.94
LOC1YFR001W SSU1P41930 458 aa2.92□□□□□ -1.94
LOC1YFR001W SHE10P53075 577 aa2.92□□□□□ -1.94
LOC1YFR001W KAP120Q02932 1032 aa2.92□□□□□ -1.94
LOC1YFR001W PPM1Q04081 328 aa2.92□□□□□ -1.94
LOC1YFR001W ROY1Q04847 553 aa2.92□□□□□ -1.94
LOC1YFR001W DON1Q05610 365 aa2.92□□□□□ -1.94
LOC1YFR001W SOR2Q07786 357 aa2.92□□□□□ -1.94
LOC1YFR001W REX4Q08237 289 aa2.92□□□□□ -1.94
LOC1YFR001W ADK2P26364 225 aa2.91□□□□□ -1.94
LOC1YFR001W SMY1P32364 656 aaKnown RBP2.91□□□□□ -1.94
LOC1YFR001W SWD3P38123 315 aa2.91□□□□□ -1.94
LOC1YFR001W MTM1P53320 366 aa2.91□□□□□ -1.94
LOC1YFR001W BNI5P53890 448 aaKnown RBP2.91□□□□□ -1.94
LOC1YFR001W BET5Q03630 159 aa2.91□□□□□ -1.94
LOC1YFR001W YDR131CQ03899 556 aa2.91□□□□□ -1.94
LOC1YFR001W SPC19Q03954 165 aa2.91□□□□□ -1.94
LOC1YFR001W HRI1Q05905 244 aaKnown RBP2.91□□□□□ -1.94
LOC1YFR001W SKI7Q08491 747 aaPredicted RBP2.91□□□□□ -1.94
LOC1YFR001W SNX3Q08826 162 aaKnown RBP2.91□□□□□ -1.94
LOC1YFR001W SCEIP03882 235 aa2.9□□□□□ -1.95
LOC1YFR001W CLN3P13365 580 aa2.9□□□□□ -1.95
LOC1YFR001W PDX1P16451 410 aa2.9□□□□□ -1.95
LOC1YFR001W CDC60P26637 1090 aaKnown RBP2.9□□□□□ -1.95
LOC1YFR001W KKQ8P36004 724 aa2.9□□□□□ -1.95
LOC1YFR001W APE3P37302 537 aaKnown RBP2.9□□□□□ -1.95
LOC1YFR001W PRE5P40302 234 aaKnown RBP2.9□□□□□ -1.95
LOC1YFR001W RSN1Q03516 953 aa2.9□□□□□ -1.95
LOC1YFR001W HER2Q03557 464 aa2.9□□□□□ -1.95
LOC1YFR001W TAF12Q03761 539 aa2.9□□□□□ -1.95
LOC1YFR001W PAL1Q05518 499 aaKnown RBP2.9□□□□□ -1.95
LOC1YFR001W RRG7Q08774 242 aaPredicted RBP2.9□□□□□ -1.95
LOC1YFR001W HRT3Q12347 344 aa2.9□□□□□ -1.95
LOC1YFR001W AFI1Q99222 893 aa2.9□□□□□ -1.95
LOC1YFR001W ADH2P00331 348 aaKnown RBP2.89□□□□□ -1.95
LOC1YFR001W ISY1P21374 235 aaPredicted RBP2.89□□□□□ -1.95
LOC1YFR001W RPC53P25441 422 aa2.89□□□□□ -1.95
LOC1YFR001W URA7P28274 579 aaKnown RBP2.89□□□□□ -1.95
LOC1YFR001W MRPL4P36517 319 aa2.89□□□□□ -1.95
LOC1YFR001W MMS4P38257 691 aa2.89□□□□□ -1.95
LOC1YFR001W YAL037WP39728 267 aa2.89□□□□□ -1.95
LOC1YFR001W PHO86P46956 311 aa2.89□□□□□ -1.95
LOC1YFR001W MDG1P53885 366 aa2.89□□□□□ -1.95
LOC1YFR001W GPI15P53961 229 aa2.89□□□□□ -1.95
LOC1YFR001W DIS3Q08162 1001 aaKnown RBP2.89□□□□□ -1.95
LOC1YFR001W TRP1P00912 224 aa2.88□□□□□ -1.95
LOC1YFR001W RPS8AP0CX39 200 aaKnown RBP2.88□□□□□ -1.95
LOC1YFR001W RPS8BP0CX40 200 aaKnown RBP2.88□□□□□ -1.95
LOC1YFR001W SPO12P17123 173 aa2.88□□□□□ -1.95
LOC1YFR001W PET123P17558 318 aa2.88□□□□□ -1.95
LOC1YFR001W SPO7P18410 259 aa2.88□□□□□ -1.95
LOC1YFR001W URA4P20051 364 aa2.88□□□□□ -1.95
LOC1YFR001W DAL2P25335 343 aa2.88□□□□□ -1.95
LOC1YFR001W ERV1P27882 189 aa2.88□□□□□ -1.95
LOC1YFR001W BRF1P29056 596 aa2.88□□□□□ -1.95
LOC1YFR001W MUD1P32605 298 aaKnown RBP2.88□□□□□ -1.95
LOC1YFR001W MNS1P32906 549 aa2.88□□□□□ -1.95
LOC1YFR001W MSG5P38590 489 aa2.88□□□□□ -1.95
LOC1YFR001W PCF11P39081 626 aaPredicted RBP2.88□□□□□ -1.95
LOC1YFR001W PAN6P40459 309 aa2.88□□□□□ -1.95
LOC1YFR001W AZR1P50080 613 aa2.88□□□□□ -1.95
LOC1YFR001W PHB2P50085 310 aa2.88□□□□□ -1.95
LOC1YFR001W SDT1P53078 280 aa2.88□□□□□ -1.95
LOC1YFR001W GIP3Q03016 1276 aa2.88□□□□□ -1.95
LOC1YFR001W ADD37Q03233 198 aa2.88□□□□□ -1.95
LOC1YFR001W ACL4Q03771 387 aa2.88□□□□□ -1.95
LOC1YFR001W YMR130WQ04223 302 aa2.88□□□□□ -1.95
LOC1YFR001W BUG1Q12191 341 aa2.88□□□□□ -1.95
LOC1YFR001W CYC3P06182 269 aa2.87□□□□□ -1.95
LOC1YFR001W NFT1P0CE68 1218 aa2.87□□□□□ -1.95
LOC1YFR001W RAD57P25301 460 aa2.87□□□□□ -1.95
LOC1YFR001W RRN10P38204 145 aa2.87□□□□□ -1.95
LOC1YFR001W RPT4P53549 437 aaKnown RBP2.87□□□□□ -1.95
LOC1YFR001W CWC25P53854 179 aaKnown RBP2.87□□□□□ -1.95
LOC1YFR001W ERB1Q04660 807 aaKnown RBP2.87□□□□□ -1.95
LOC1YFR001W DCS1Q06151 350 aa2.87□□□□□ -1.95
LOC1YFR001W TY1B-AO13527 1196 aaKnown RBP2.86□□□□□ -1.95
LOC1YFR001W CLN1P20437 546 aa2.86□□□□□ -1.95
LOC1YFR001W KAR9P32526 644 aa2.86□□□□□ -1.95
LOC1YFR001W TFB1P32776 642 aa2.86□□□□□ -1.95
LOC1YFR001W RRP4P38792 359 aaKnown RBP2.86□□□□□ -1.95
LOC1YFR001W CAK1P43568 368 aaPredicted RBP2.86□□□□□ -1.95
LOC1YFR001W OAZ1Q02803 292 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms