RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W ADF1Q2V2Q1 113 aa1.33□□□□□ -2.2
CDC36YDL165W YKL068W-AQ3E826 78 aa1.33□□□□□ -2.2
CDC36YDL165W SSM4P40318 1319 aa1.33□□□□□ -2.2
CDC36YDL165W LPD1P09624 499 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W APE1P14904 514 aa1.32□□□□□ -2.2
CDC36YDL165W OM45P16547 393 aa1.32□□□□□ -2.2
CDC36YDL165W PFK2P16862 959 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
CDC36YDL165W SPE2P21182 396 aa1.32□□□□□ -2.2
CDC36YDL165W DBF2P22204 572 aa1.32□□□□□ -2.2
CDC36YDL165W TRX1P22217 103 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W GFD2P25370 566 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W ZIP1P31111 875 aa1.32□□□□□ -2.2
CDC36YDL165W SSH4P32343 579 aa1.32□□□□□ -2.2
CDC36YDL165W MCM10P32354 571 aa1.32□□□□□ -2.2
CDC36YDL165W ASF2P32448 525 aaPredicted RBP1.32□□□□□ -2.2
CDC36YDL165W NPL6P32832 435 aa1.32□□□□□ -2.2
CDC36YDL165W RAD5P32849 1169 aaPredicted RBP1.32□□□□□ -2.2
CDC36YDL165W MRP4P32902 394 aa1.32□□□□□ -2.2
CDC36YDL165W XRS2P33301 854 aa1.32□□□□□ -2.2
CDC36YDL165W BUD2P33314 1104 aa1.32□□□□□ -2.2
CDC36YDL165W YKT6P36015 200 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W YPT52P36018 234 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W DBP7P36120 742 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W CAF4P36130 643 aa1.32□□□□□ -2.2
CDC36YDL165W ROT2P38138 954 aa1.32□□□□□ -2.2
CDC36YDL165W FES1P38260 290 aa1.32□□□□□ -2.2
CDC36YDL165W YMR262WP38430 313 aa1.32□□□□□ -2.2
CDC36YDL165W MSR1P38714 643 aa1.32□□□□□ -2.2
CDC36YDL165W YHI9P38765 294 aa1.32□□□□□ -2.2
CDC36YDL165W VPS45P38932 577 aa1.32□□□□□ -2.2
CDC36YDL165W UME6P39001 836 aa1.32□□□□□ -2.2
CDC36YDL165W POP2P39008 433 aa1.32□□□□□ -2.2
CDC36YDL165W TIF4631P39935 952 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W AIM10P39965 576 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W NOP16P40007 231 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W YER010CP40011 234 aa1.32□□□□□ -2.2
CDC36YDL165W FCY21P40039 528 aa1.32□□□□□ -2.2
CDC36YDL165W BUR6P40096 142 aa1.32□□□□□ -2.2
CDC36YDL165W PCL7P40186 285 aa1.32□□□□□ -2.2
CDC36YDL165W JEM1P40358 645 aa1.32□□□□□ -2.2
CDC36YDL165W AGE2P40529 298 aa1.32□□□□□ -2.2
CDC36YDL165W IST3P40565 148 aaPredicted RBP1.32□□□□□ -2.2
CDC36YDL165W IME4P41833 600 aa1.32□□□□□ -2.2
CDC36YDL165W STB1P42845 420 aa1.32□□□□□ -2.2
CDC36YDL165W AGX1P43567 385 aa1.32□□□□□ -2.2
CDC36YDL165W FYV8P46949 817 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W ABM1P47146 123 aa1.32□□□□□ -2.2
CDC36YDL165W TOM22P49334 152 aa1.32□□□□□ -2.2
CDC36YDL165W IMD4P50094 524 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W ASE1P50275 885 aa1.32□□□□□ -2.2
CDC36YDL165W YML6P51998 286 aa1.32□□□□□ -2.2
CDC36YDL165W KAP114P53067 1004 aa1.32□□□□□ -2.2
CDC36YDL165W STR3P53101 465 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W LIF1P53150 421 aa1.32□□□□□ -2.2
CDC36YDL165W YGR111WP53265 400 aa1.32□□□□□ -2.2
CDC36YDL165W LSB1P53281 241 aa1.32□□□□□ -2.2
CDC36YDL165W GOR1P53839 350 aa1.32□□□□□ -2.2
CDC36YDL165W CWC25P53854 179 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W VPS9P54787 451 aa1.32□□□□□ -2.2
CDC36YDL165W YKR005CQ02203 525 aa1.32□□□□□ -2.2
CDC36YDL165W RMI1Q02685 241 aa1.32□□□□□ -2.2
CDC36YDL165W SWP1Q02795 286 aa1.32□□□□□ -2.2
CDC36YDL165W INA17Q02888 182 aa1.32□□□□□ -2.2
CDC36YDL165W KAP120Q02932 1032 aa1.32□□□□□ -2.2
CDC36YDL165W SRL4Q03085 281 aa1.32□□□□□ -2.2
CDC36YDL165W MUB1Q03162 620 aa1.32□□□□□ -2.2
CDC36YDL165W PDS5Q04264 1277 aa1.32□□□□□ -2.2
CDC36YDL165W YKU80Q04437 629 aa1.32□□□□□ -2.2
CDC36YDL165W FAR8Q05040 523 aa1.32□□□□□ -2.2
CDC36YDL165W GLO2Q05584 274 aa1.32□□□□□ -2.2
CDC36YDL165W DTD1Q07648 150 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W YPD1Q07688 167 aa1.32□□□□□ -2.2
CDC36YDL165W RPS10AQ08745 105 aaPredicted RBP1.32□□□□□ -2.2
CDC36YDL165W YOR289WQ12012 251 aaPredicted RBP1.32□□□□□ -2.2
CDC36YDL165W APL4Q12028 832 aa1.32□□□□□ -2.2
CDC36YDL165W VIK1Q12045 647 aa1.32□□□□□ -2.2
CDC36YDL165W MSH5Q12175 901 aa1.32□□□□□ -2.2
CDC36YDL165W YDL009CQ12210 107 aa1.32□□□□□ -2.2
CDC36YDL165W HTZ1Q12692 134 aaKnown RBP1.32□□□□□ -2.2
CDC36YDL165W RPL6BP05739 176 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W PDE2P06776 526 aa1.31□□□□□ -2.2
CDC36YDL165W RAD1P06777 1100 aa1.31□□□□□ -2.2
CDC36YDL165W GCN3P14741 305 aa1.31□□□□□ -2.2
CDC36YDL165W AAC3P18238 307 aa1.31□□□□□ -2.2
CDC36YDL165W URA4P20051 364 aa1.31□□□□□ -2.2
CDC36YDL165W PRP2P20095 876 aaPredicted RBP1.31□□□□□ -2.2
CDC36YDL165W KGD1P20967 1014 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W UBA1P22515 1024 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W SGV1P23293 657 aaKnown RBP1.31□□□□□ -2.2
CDC36YDL165W CLB3P24870 427 aa1.31□□□□□ -2.2
CDC36YDL165W IMP2'P32351 346 aa1.31□□□□□ -2.2
CDC36YDL165W PAH1P32567 862 aa1.31□□□□□ -2.2
CDC36YDL165W DOA4P32571 926 aa1.31□□□□□ -2.2
CDC36YDL165W SRB5P32585 307 aa1.31□□□□□ -2.2
CDC36YDL165W TFB1P32776 642 aa1.31□□□□□ -2.2
CDC36YDL165W YBL010CP32788 280 aa1.31□□□□□ -2.2
CDC36YDL165W YKL097CP34245 136 aa1.31□□□□□ -2.2
CDC36YDL165W MRPL36P36531 177 aa1.31□□□□□ -2.2
CDC36YDL165W BMT2P38278 337 aa1.31□□□□□ -2.2
CDC36YDL165W PEX32P38292 413 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms