RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W CDC50P25656 391 aa1.92□□□□□ -2.1
HMRA1YCR097W APE2P32454 952 aaKnown RBP1.92□□□□□ -2.1
HMRA1YCR097W ZUO1P32527 433 aaKnown RBP1.92□□□□□ -2.1
HMRA1YCR097W LYS14P40971 790 aa1.92□□□□□ -2.1
HMRA1YCR097W AZR1P50080 613 aa1.92□□□□□ -2.1
HMRA1YCR097W RIF2Q06208 395 aa1.92□□□□□ -2.1
HMRA1YCR097W HIS4P00815 799 aaKnown RBP1.91□□□□□ -2.1
HMRA1YCR097W YME2P32843 850 aa1.91□□□□□ -2.1
HMRA1YCR097W CCT2P39076 527 aaKnown RBP1.91□□□□□ -2.1
HMRA1YCR097W YER184CP39961 794 aa1.91□□□□□ -2.1
HMRA1YCR097W DUO1P53168 247 aaKnown RBP1.91□□□□□ -2.1
HMRA1YCR097W KTR6P54070 446 aa1.91□□□□□ -2.1
HMRA1YCR097W SGT1Q08446 395 aa1.91□□□□□ -2.1
HMRA1YCR097W HUA2Q12134 243 aa1.91□□□□□ -2.1
HMRA1YCR097W YJR112W-AQ3E743 109 aa1.91□□□□□ -2.1
HMRA1YCR097W PFF1P38244 976 aa1.9□□□□□ -2.11
HMRA1YCR097W FLC2P39719 783 aa1.9□□□□□ -2.11
HMRA1YCR097W TFG2P41896 400 aaPredicted RBP1.9□□□□□ -2.11
HMRA1YCR097W HSP31Q04432 237 aa1.9□□□□□ -2.11
HMRA1YCR097W ORT1Q12375 292 aa1.9□□□□□ -2.11
HMRA1YCR097W APC2Q12440 853 aa1.9□□□□□ -2.11
HMRA1YCR097W FOL3Q12676 427 aaPredicted RBP1.9□□□□□ -2.11
HMRA1YCR097W RHO2P06781 192 aa1.89□□□□□ -2.11
HMRA1YCR097W MRS6P32864 603 aaKnown RBP1.89□□□□□ -2.11
HMRA1YCR097W MRPL27P36526 146 aaPredicted RBP1.89□□□□□ -2.11
HMRA1YCR097W BNS1P50084 137 aa1.89□□□□□ -2.11
HMRA1YCR097W RAD57P25301 460 aa1.88□□□□□ -2.11
HMRA1YCR097W PRP21P32524 280 aaPredicted RBP1.88□□□□□ -2.11
HMRA1YCR097W STP2P38704 541 aa1.88□□□□□ -2.11
HMRA1YCR097W YIF1P53845 314 aaKnown RBP1.88□□□□□ -2.11
HMRA1YCR097W KTR5P53966 522 aaPredicted RBP1.88□□□□□ -2.11
HMRA1YCR097W YMR102CQ03177 834 aa1.88□□□□□ -2.11
HMRA1YCR097W CMS1Q07897 291 aaKnown RBP1.88□□□□□ -2.11
HMRA1YCR097W MRE11P32829 692 aa1.87□□□□□ -2.11
HMRA1YCR097W WSS1P38838 269 aa1.87□□□□□ -2.11
HMRA1YCR097W YIL029CP40538 142 aa1.87□□□□□ -2.11
HMRA1YCR097W PET130P47065 347 aa1.87□□□□□ -2.11
HMRA1YCR097W RMD9P53140 646 aaKnown RBP1.87□□□□□ -2.11
HMRA1YCR097W YGR066CP53242 292 aa1.87□□□□□ -2.11
HMRA1YCR097W BET5Q03630 159 aa1.87□□□□□ -2.11
HMRA1YCR097W BCH1Q05029 724 aa1.87□□□□□ -2.11
HMRA1YCR097W RMD5Q12508 421 aa1.87□□□□□ -2.11
HMRA1YCR097W TY1B-AO13527 1196 aaKnown RBP1.86□□□□□ -2.11
HMRA1YCR097W CYM1P32898 989 aa1.86□□□□□ -2.11
HMRA1YCR097W ATG18P43601 500 aa1.86□□□□□ -2.11
HMRA1YCR097W RPN14P53196 417 aa1.86□□□□□ -2.11
HMRA1YCR097W TAP42Q04372 366 aa1.86□□□□□ -2.11
HMRA1YCR097W AFG1P32317 509 aa1.85□□□□□ -2.11
HMRA1YCR097W SBE22P38814 852 aa1.85□□□□□ -2.11
HMRA1YCR097W IES5P40060 125 aa1.85□□□□□ -2.11
HMRA1YCR097W YDR061WQ12298 539 aa1.85□□□□□ -2.11
HMRA1YCR097W SEC39Q12745 709 aa1.85□□□□□ -2.11
HMRA1YCR097W ECT1P33412 323 aa1.84□□□□□ -2.11
HMRA1YCR097W EGT2P42835 1041 aa1.84□□□□□ -2.11
HMRA1YCR097W CPR7P47103 393 aa1.84□□□□□ -2.11
HMRA1YCR097W HMS2P47175 358 aa1.84□□□□□ -2.11
HMRA1YCR097W HOT1Q03213 719 aa1.84□□□□□ -2.11
HMRA1YCR097W SYF1Q04048 859 aaPredicted RBP1.84□□□□□ -2.11
HMRA1YCR097W YGK3Q12222 375 aaPredicted RBP1.84□□□□□ -2.11
HMRA1YCR097W YLR278CQ05854 1341 aa1.84□□□□□ -2.12
HMRA1YCR097W CDC16P09798 840 aa1.83□□□□□ -2.12
HMRA1YCR097W RAD14P28519 371 aa1.83□□□□□ -2.12
HMRA1YCR097W NIP100P33420 868 aa1.83□□□□□ -2.12
HMRA1YCR097W YGR149WP48236 432 aa1.83□□□□□ -2.12
HMRA1YCR097W MST27P53176 234 aa1.83□□□□□ -2.12
HMRA1YCR097W RTN1Q04947 295 aaKnown RBP1.83□□□□□ -2.12
HMRA1YCR097W SNU66Q12420 587 aaPredicted RBP1.83□□□□□ -2.12
HMRA1YCR097W IDH2P28241 369 aaKnown RBP1.82□□□□□ -2.12
HMRA1YCR097W PCF11P39081 626 aaPredicted RBP1.82□□□□□ -2.12
HMRA1YCR097W YPS6P40583 537 aa1.82□□□□□ -2.12
HMRA1YCR097W HRT1Q08273 121 aa1.82□□□□□ -2.12
HMRA1YCR097W SKI7Q08491 747 aaPredicted RBP1.82□□□□□ -2.12
HMRA1YCR097W ZRC1P20107 442 aa1.81□□□□□ -2.12
HMRA1YCR097W SPB1P25582 841 aaPredicted RBP1.81□□□□□ -2.12
HMRA1YCR097W SPO73P40031 143 aa1.81□□□□□ -2.12
HMRA1YCR097W SAS2P40963 338 aa1.81□□□□□ -2.12
HMRA1YCR097W SFH5P47008 294 aa1.81□□□□□ -2.12
HMRA1YCR097W REX4Q08237 289 aa1.81□□□□□ -2.12
HMRA1YCR097W SEC53P07283 254 aaKnown RBP1.8□□□□□ -2.12
HMRA1YCR097W DFR1P07807 211 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
HMRA1YCR097W ANR2P36090 516 aaPredicted RBP1.8□□□□□ -2.12
HMRA1YCR097W YHR054CP38780 354 aa1.8□□□□□ -2.12
HMRA1YCR097W FRT2P39734 528 aa1.8□□□□□ -2.12
HMRA1YCR097W IGD1P43598 195 aa1.8□□□□□ -2.12
HMRA1YCR097W MRM2P53123 320 aa1.8□□□□□ -2.12
HMRA1YCR097W TPI1P00942 248 aaKnown RBP1.79□□□□□ -2.12
HMRA1YCR097W ILV5P06168 395 aaKnown RBP1.79□□□□□ -2.12
HMRA1YCR097W PUT4P15380 627 aa1.79□□□□□ -2.12
HMRA1YCR097W AGA2P32781 87 aa1.79□□□□□ -2.12
HMRA1YCR097W PTI1P39927 425 aaPredicted RBP1.79□□□□□ -2.12
HMRA1YCR097W ESL1P40456 1118 aa1.79□□□□□ -2.12
HMRA1YCR097W YML131WQ03102 365 aa1.79□□□□□ -2.12
HMRA1YCR097W RCN2Q12044 265 aa1.79□□□□□ -2.12
HMRA1YCR097W NAG1Q8TGN9 163 aa1.79□□□□□ -2.12
HMRA1YCR097W CHL4P38907 458 aa1.78□□□□□ -2.12
HMRA1YCR097W YGR067CP53243 804 aa1.78□□□□□ -2.12
HMRA1YCR097W SPO12P17123 173 aa1.77□□□□□ -2.13
HMRA1YCR097W COX14P39103 70 aa1.77□□□□□ -2.13
HMRA1YCR097W HAC1P41546 238 aa1.77□□□□□ -2.13
HMRA1YCR097W FOB1O13329 566 aa1.76□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms