RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 GGPS1O95749 300 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 INHAP05111 366 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 ARP10275 920 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 ICAM3P32942 547 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 LONP1P36776 959 aaKnown RBP14.59□□□□□ -0.07
PHGDH-218ENST00000641491 TECP42680 631 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 JAK3P52333 1124 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 KRT79Q5XKE5 535 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 MIS18BP1Q6P0N0 1132 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 LINC00301Q8NCQ3 95 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 CYP2W1Q8TAV3 490 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 CRYGNQ8WXF5 182 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 FGD4Q96M96 766 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 MBOAT7Q96N66 472 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 UIMC1Q96RL1 719 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 SENP7Q9BQF6 1050 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 HMX1Q9NP08 348 aaPredicted RBP14.59□□□□□ -0.07
PHGDH-218ENST00000641491 SLC9A2Q9UBY0 812 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 ASTN1O14525 1302 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 NFASCO94856 1347 aa14.59□□□□□ -0.07
PHGDH-218ENST00000641491 IGLV3-22A0A075B6J6 115 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 WDR64B1ANS9 1081 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 BACH1O14867 736 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 SORBS3O60504 671 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 DKC1O60832 514 aaKnown RBP eCLIP14.58□□□□□ -0.081e-16■■■■■ 39.7
PHGDH-218ENST00000641491 CUTAO60888 179 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 SNAI1O95863 264 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-218ENST00000641491 MYCNP04198 464 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-218ENST00000641491 UBA1P22314 1058 aaKnown RBP14.58□□□□□ -0.08
PHGDH-218ENST00000641491 SFNP31947 248 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 UBA7P41226 1012 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 ADCYAP1R1P41586 468 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 CPT1AP50416 773 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 LAMC2Q13753 1193 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 ZRSR1Q15695 479 aaKnown RBP14.58□□□□□ -0.08
PHGDH-218ENST00000641491 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 CYFIP1Q7L576 1253 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 MIER3Q7Z3K6 550 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 SMAP1Q8IYB5 467 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-218ENST00000641491 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
PHGDH-218ENST00000641491 CALML4Q96GE6 196 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 AK8Q96MA6 479 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 SPATA33Q96N06 139 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 PYM1Q9BRP8 204 aaKnown RBP14.58□□□□□ -0.08
PHGDH-218ENST00000641491 AZI2Q9H6S1 392 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 KCNMB3Q9NPA1 279 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 FLRT1Q9NZU1 646 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 LRWD1Q9UFC0 647 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 CCDC39Q9UFE4 941 aa14.58□□□□□ -0.08
PHGDH-218ENST00000641491 DDX49Q9Y6V7 483 aaKnown RBP14.58□□□□□ -0.08
PHGDH-218ENST00000641491 PSAPP07602 524 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 LY6KQ17RY6 165 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 PRAMEF19Q5SWL8 479 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 FAM160B1Q5W0V3 765 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 ZNF746Q6NUN9 644 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-218ENST00000641491 METTL7BQ6UX53 244 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 CCDC73Q6ZRK6 1079 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 ETNPPLQ8TBG4 499 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 SLC5A5Q92911 643 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 TMEM60Q9H2L4 133 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 GDPD2Q9HCC8 539 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 COLQQ9Y215 455 aaPredicted RBP14.57□□□□□ -0.08
PHGDH-218ENST00000641491 SRPRBQ9Y5M8 271 aaKnown RBP14.57□□□□□ -0.08
PHGDH-218ENST00000641491 KDM3AQ9Y4C1 1321 aa14.57□□□□□ -0.08
PHGDH-218ENST00000641491 SEPT4O43236 478 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.084e-8■■■□□ 17.3
PHGDH-218ENST00000641491 CACNB2Q08289 660 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-218ENST00000641491 DUSP28Q4G0W2 176 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 CELF3Q5SZQ8 465 aaKnown RBP14.56□□□□□ -0.08
PHGDH-218ENST00000641491 TLK2Q86UE8 772 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 CKAP2LQ8IYA6 745 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 RDM1Q8NG50 284 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 NEK9Q8TD19 979 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 SNX29Q8TEQ0 813 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 SH3TC2Q8TF17 1288 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 ATP6V0A1Q93050 837 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 PDGFCQ9NRA1 345 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 DDX41Q9UJV9 622 aaKnown RBP14.56□□□□□ -0.08
PHGDH-218ENST00000641491 RCOR1Q9UKL0 485 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
PHGDH-218ENST00000641491 ELP1O95163 1332 aa14.56□□□□□ -0.08
PHGDH-218ENST00000641491 TRIOBPQ9H2D6 2365 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 MGAMO43451 1857 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 WNT7AO00755 349 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-218ENST00000641491 CYBAP13498 195 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 KCNA2P16389 499 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 EN2P19622 333 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-218ENST00000641491 CCT6AP40227 531 aaKnown RBP14.55□□□□□ -0.08
PHGDH-218ENST00000641491 PDIA5Q14554 519 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 PTPAQ15257 358 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 TAPT1Q6NXT6 567 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 RNF180Q86T96 592 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 GLG1Q92896 1179 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 LENG9Q96B70 501 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 ARMC5Q96C12 935 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 MTMR9Q96QG7 549 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 DISC1Q9NRI5 854 aa14.55□□□□□ -0.08
PHGDH-218ENST00000641491 MORC2Q9Y6X9 1032 aaPredicted RBP14.55□□□□□ -0.08
PHGDH-218ENST00000641491 RBM47A0AV96 593 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 251.7 ms