RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PCDH18Q9HCL0 1135 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 TRIM39Q9HCM9 518 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 FANCLQ9NW38 375 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 MYOTQ9UBF9 498 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 SFMBT1Q9UHJ3 866 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 SH3D21A4FU49 640 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 FAM47E-STBD1D6RA91 191 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 KRIT1O00522 736 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 TRIM13O60858 407 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 RASGRP1O95267 797 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 ASMTLO95671 621 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 CRTAMO95727 393 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 VMACQ2NL98 169 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 CR1LQ2VPA4 569 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 TKFCQ3LXA3 575 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 FNDC3BQ53EP0 1204 aaKnown RBP4.53□□□□□ -1.68
SCFD1-213ENST00000554776 BRAPQ7Z569 592 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 FGD2Q7Z6J4 655 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 MTDHQ86UE4 582 aaKnown RBP4.53□□□□□ -1.68
SCFD1-213ENST00000554776 ZC3H18Q86VM9 953 aaKnown RBP4.53□□□□□ -1.68
SCFD1-213ENST00000554776 HOMER1Q86YM7 354 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 SYNPOQ8N3V7 929 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 FAM26EQ8N5C1 309 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 UHMK1Q8TAS1 419 aaKnown RBP4.53□□□□□ -1.68
SCFD1-213ENST00000554776 APPBP2Q92624 585 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 DDX11Q96FC9 970 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 CLUHP3Q96NS8 147 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 KCNC2Q96PR1 638 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 GORASP1Q9BQQ3 440 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 IPPKQ9H8X2 491 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 NGRNQ9NPE2 291 aaKnown RBP4.53□□□□□ -1.68
SCFD1-213ENST00000554776 DTLQ9NZJ0 730 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 ASH2LQ9UBL3 628 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 PCDHA9Q9Y5H5 950 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 PCDHA8Q9Y5H6 950 aa4.53□□□□□ -1.68
SCFD1-213ENST00000554776 CDC45O75419 566 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 GNAT1P11488 350 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 NAT1P18440 290 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 STAT5AP42229 794 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 GUCY1A3Q02108 690 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 SPIRE1Q08AE8 756 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 PAK1Q13153 545 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 CD300LDQ6UXZ3 194 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 C16orf86Q6ZW13 317 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 MARCH10Q8NA82 808 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-213ENST00000554776 TTLL11Q8NHH1 800 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 PCDH19Q8TAB3 1148 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 TOE1Q96GM8 510 aaKnown RBP4.52□□□□□ -1.69
SCFD1-213ENST00000554776 KCNJ15Q99712 375 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 SYT3Q9BQG1 590 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 C11orf84Q9BUA3 381 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-213ENST00000554776 PDGFDQ9GZP0 370 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-213ENST00000554776 HSPBP1Q9NZL4 362 aa4.52□□□□□ -1.69
SCFD1-213ENST00000554776 TCRBV16S1A1N1A0A5B0 115 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 SLC27A2O14975 620 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 NKRFO15226 690 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCFD1-213ENST00000554776 RFPL3O75679 317 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 DNAJC8O75937 253 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-213ENST00000554776 LRG1P02750 347 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 COL6A2P12110 1019 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 BMP7P18075 431 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 HSD3B2P26439 372 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 ITGA1P56199 1179 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 NKX3-2P78367 333 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 TCEA2Q15560 299 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 C21orf62-AS1Q17RA5 79 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 TEPPQ6URK8 271 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 LIPIQ6XZB0 460 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 KIAA0907Q7Z7F0 614 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-213ENST00000554776 TRIM48Q8IWZ4 208 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 KYQ8NBH2 561 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 ZNF526Q8TF50 670 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-213ENST00000554776 CLEC4DQ8WXI8 215 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 ZBTB8AQ96BR9 441 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 PUS7Q96PZ0 661 aaKnown RBP4.51□□□□□ -1.69
SCFD1-213ENST00000554776 YIPF4Q9BSR8 244 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 LUC7LQ9NQ29 371 aaKnown RBP4.51□□□□□ -1.69
SCFD1-213ENST00000554776 SPATA6Q9NWH7 488 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-213ENST00000554776 RAPGEFL1Q9UHV5 662 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 NUB1Q9Y5A7 615 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 CD2APQ9Y5K6 639 aa4.51□□□□□ -1.69
SCFD1-213ENST00000554776 PPM1GO15355 546 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-213ENST00000554776 CKMP06732 381 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 INHBBP09529 407 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 KCNA6P17658 529 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 CANXP27824 592 aaKnown RBP4.5□□□□□ -1.69
SCFD1-213ENST00000554776 THBS2P35442 1172 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 EPHA5P54756 1037 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 SLURP1P55000 103 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 PABPC4Q13310 644 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCFD1-213ENST00000554776 TUSC3Q13454 348 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 SMAD4Q13485 552 aaKnown RBP4.5□□□□□ -1.69
SCFD1-213ENST00000554776 PLEKHG4Q58EX7 1191 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 ABHD17CQ6PCB6 329 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 TTLL10Q6ZVT0 673 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 SP8Q8IXZ3 490 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 ADGRG2Q8IZP9 1017 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 TTLL6Q8N841 843 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 FBXW5Q969U6 566 aa4.5□□□□□ -1.69
SCFD1-213ENST00000554776 MAGEB10Q96LZ2 347 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 280.4 ms