RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 COLQQ9Y215 455 aaPredicted RBP22.07■■□□□ 1.12
DDX55-207ENST00000540763 WDR81Q562E7 1941 aa22.06■■□□□ 1.12
DDX55-207ENST00000540763 MYCNP04198 464 aaPredicted RBP22.06■■□□□ 1.12
DDX55-207ENST00000540763 MMP3P08254 477 aa22.06■■□□□ 1.12
DDX55-207ENST00000540763 PTGS1P23219 599 aa22.06■■□□□ 1.12
DDX55-207ENST00000540763 U2AF2P26368 475 aaKnown RBP eCLIP22.06■■□□□ 1.12
DDX55-207ENST00000540763 FXR1P51114 621 aaKnown RBP eCLIP22.06■■□□□ 1.12
DDX55-207ENST00000540763 BEX3Q00994 111 aa22.06■■□□□ 1.12
DDX55-207ENST00000540763 AGO4Q9HCK5 861 aaKnown RBP22.06■■□□□ 1.12
DDX55-207ENST00000540763 ELP1O95163 1332 aa22.06■■□□□ 1.12
DDX55-207ENST00000540763 A0A1W2PQ45 241 aaPredicted RBP22.05■■□□□ 1.12
DDX55-207ENST00000540763 A0A1W2PQY0 241 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 H0YGN5 161 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 H3BQV1 296 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 ATP9AO75110 1047 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 ARP10275 920 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 IRX5P78411 483 aaPredicted RBP22.05■■□□□ 1.12
DDX55-207ENST00000540763 DGKDQ16760 1214 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 PRR16Q569H4 304 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 EARS2Q5JPH6 523 aaKnown RBP22.05■■□□□ 1.12
DDX55-207ENST00000540763 LARP1BQ659C4 914 aaKnown RBP22.05■■□□□ 1.12
DDX55-207ENST00000540763 NOSTRINQ8IVI9 506 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 AFG1LQ8WV93 481 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 GLT1D1Q96MS3 346 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 SPATA33Q96N06 139 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 SDF4Q9BRK5 362 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 SEZ6LQ9BYH1 1024 aa22.05■■□□□ 1.12
DDX55-207ENST00000540763 PURAQ00577 322 aaKnown RBP22.04■■□□□ 1.12
DDX55-207ENST00000540763 GNL2Q13823 731 aaKnown RBP22.04■■□□□ 1.12
DDX55-207ENST00000540763 LETM2Q2VYF4 491 aa22.04■■□□□ 1.12
DDX55-207ENST00000540763 HSDL1Q3SXM5 330 aa22.04■■□□□ 1.12
DDX55-207ENST00000540763 C1orf53Q5VUE5 145 aa22.04■■□□□ 1.12
DDX55-207ENST00000540763 CYFIP1Q7L576 1253 aa22.04■■□□□ 1.12
DDX55-207ENST00000540763 HTATIP2Q9BUP3 242 aa22.04■■□□□ 1.12
DDX55-207ENST00000540763 TBC1D22BQ9NU19 505 aa22.04■■□□□ 1.12
DDX55-207ENST00000540763 IPO5O00410 1097 aaKnown RBP22.03■■□□□ 1.12
DDX55-207ENST00000540763 NOP56O00567 594 aaKnown RBP22.03■■□□□ 1.12
DDX55-207ENST00000540763 PPFIA4O75335 1185 aa22.03■■□□□ 1.12
DDX55-207ENST00000540763 TDP2O95551 362 aa22.03■■□□□ 1.12
DDX55-207ENST00000540763 PDIA4P13667 645 aaKnown RBP22.03■■□□□ 1.12
DDX55-207ENST00000540763 TRAPPC10P48553 1259 aa22.03■■□□□ 1.12
DDX55-207ENST00000540763 ORC2Q13416 577 aaPredicted RBP22.03■■□□□ 1.12
DDX55-207ENST00000540763 SNX17Q15036 470 aa22.03■■□□□ 1.12
DDX55-207ENST00000540763 ZNF577Q9BSK1 485 aa22.03■■□□□ 1.12
DDX55-207ENST00000540763 MTG1Q9BT17 334 aaPredicted RBP22.03■■□□□ 1.12
DDX55-207ENST00000540763 SENP6Q9GZR1 1112 aaPredicted RBP22.03■■□□□ 1.12
DDX55-207ENST00000540763 JPH1Q9HDC5 661 aaPredicted RBP22.03■■□□□ 1.12
DDX55-207ENST00000540763 DDX25Q9UHL0 483 aaKnown RBP22.03■■□□□ 1.12
DDX55-207ENST00000540763 FAM205CA6NFA0 338 aa22.02■■□□□ 1.12
DDX55-207ENST00000540763 TBX3O15119 743 aa22.02■■□□□ 1.12
DDX55-207ENST00000540763 HSP90AA1P07900 732 aaKnown RBP22.02■■□□□ 1.12
DDX55-207ENST00000540763 ITGB3BPQ13352 177 aaPredicted RBP22.02■■□□□ 1.12
DDX55-207ENST00000540763 DPF3Q92784 378 aa22.02■■□□□ 1.12
DDX55-207ENST00000540763 RIT2Q99578 217 aa22.02■■□□□ 1.12
DDX55-207ENST00000540763 GPR20Q99678 358 aa22.02■■□□□ 1.12
DDX55-207ENST00000540763 STARD7Q9NQZ5 370 aa22.02■■□□□ 1.12
DDX55-207ENST00000540763 SLC9A2Q9UBY0 812 aa22.02■■□□□ 1.12
DDX55-207ENST00000540763 KIF28PB7ZC32 967 aa22.01■■□□□ 1.11
DDX55-207ENST00000540763 MSH4O15457 936 aa22.01■■□□□ 1.11
DDX55-207ENST00000540763 CCNT1O60563 726 aaKnown RBP22.01■■□□□ 1.11
DDX55-207ENST00000540763 BECN1Q14457 450 aa22.01■■□□□ 1.11
DDX55-207ENST00000540763 CXCL17Q6UXB2 119 aa22.01■■□□□ 1.11
DDX55-207ENST00000540763 SLC5A5Q92911 643 aa22.01■■□□□ 1.11
DDX55-207ENST00000540763 KATNAL1Q9BW62 490 aa22.01■■□□□ 1.11
DDX55-207ENST00000540763 NOL7Q9UMY1 257 aaKnown RBP22.01■■□□□ 1.11
DDX55-207ENST00000540763 MYH15Q9Y2K3 1946 aa22.01■■□□□ 1.11
DDX55-207ENST00000540763 MYH9P35579 1960 aaKnown RBP22.01■■□□□ 1.11
DDX55-207ENST00000540763 A0A0U1RQG5 324 aaPredicted RBP22■■□□□ 1.11
DDX55-207ENST00000540763 DHX15O43143 795 aaKnown RBP22■■□□□ 1.11
DDX55-207ENST00000540763 F2P00734 622 aa22■■□□□ 1.11
DDX55-207ENST00000540763 MYL3P08590 195 aa22■■□□□ 1.11
DDX55-207ENST00000540763 SLC39A5Q6ZMH5 540 aa22■■□□□ 1.11
DDX55-207ENST00000540763 ETNPPLQ8TBG4 499 aa22■■□□□ 1.11
DDX55-207ENST00000540763 FERMT2Q96AC1 680 aa22■■□□□ 1.11
DDX55-207ENST00000540763 FAM20AQ96MK3 541 aa22■■□□□ 1.11
DDX55-207ENST00000540763 BCAS3Q9H6U6 928 aa22■■□□□ 1.11
DDX55-207ENST00000540763 KCNMB3Q9NPA1 279 aa22■■□□□ 1.11
DDX55-207ENST00000540763 PKD2L1Q9P0L9 805 aa22■■□□□ 1.11
DDX55-207ENST00000540763 TCEAL9Q9UHQ7 104 aa22■■□□□ 1.11
DDX55-207ENST00000540763 MROH7Q68CQ1 1323 aa22■■□□□ 1.11
DDX55-207ENST00000540763 SLC37A4O43826 429 aa21.99■■□□□ 1.11
DDX55-207ENST00000540763 KRT76Q01546 638 aa21.99■■□□□ 1.11
DDX55-207ENST00000540763 ZNF746Q6NUN9 644 aaPredicted RBP21.99■■□□□ 1.11
DDX55-207ENST00000540763 SLC43A3Q8NBI5 491 aa21.99■■□□□ 1.11
DDX55-207ENST00000540763 SEPT1Q8WYJ6 367 aa21.99■■□□□ 1.11
DDX55-207ENST00000540763 EMSYQ7Z589 1322 aa21.99■■□□□ 1.11
DDX55-207ENST00000540763 ATG7O95352 703 aa21.98■■□□□ 1.11
DDX55-207ENST00000540763 LGALS2P05162 132 aa21.98■■□□□ 1.11
DDX55-207ENST00000540763 SYT1P21579 422 aa21.98■■□□□ 1.11
DDX55-207ENST00000540763 MCTP1Q6DN14 999 aa21.98■■□□□ 1.11
DDX55-207ENST00000540763 SMAP1Q8IYB5 467 aaPredicted RBP21.98■■□□□ 1.11
DDX55-207ENST00000540763 TEKT3Q9BXF9 490 aa21.98■■□□□ 1.11
DDX55-207ENST00000540763 SORBS3O60504 671 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 GAS7O60861 476 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 PSMD10O75832 226 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 TCF7P36402 384 aaPredicted RBP21.97■■□□□ 1.11
DDX55-207ENST00000540763 ACTR2P61160 394 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 LRRC26Q2I0M4 334 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 RILPL1Q5EBL4 403 aa21.97■■□□□ 1.11
DDX55-207ENST00000540763 LRCH2Q5VUJ6 765 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms