RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 CCDC85CA6NKD9 419 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 SLC27A2O14975 620 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 LRG1P02750 347 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 ZNF28P17035 718 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 SSRP1Q08945 709 aaKnown RBP5.23□□□□□ -1.57
NF1-213ENST00000489712 PRAMEF18Q5VWM3 479 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 BORAQ6PGQ7 559 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 SPATC1Q76KD6 591 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 FERMT3Q86UX7 667 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 IFNL3Q8IZI9 196 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 UHMK1Q8TAS1 419 aaKnown RBP5.23□□□□□ -1.57
NF1-213ENST00000489712 DDX1Q92499 740 aaKnown RBP5.23□□□□□ -1.57
NF1-213ENST00000489712 ARMC5Q96C12 935 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 CDC6Q99741 560 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 HIRIP3Q9BW71 556 aaPredicted RBP5.23□□□□□ -1.57
NF1-213ENST00000489712 CCDC113Q9H0I3 377 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 SIRPGQ9P1W8 387 aa5.23□□□□□ -1.57
NF1-213ENST00000489712 CNOT11Q9UKZ1 510 aaKnown RBP5.23□□□□□ -1.57
NF1-213ENST00000489712 BLACEA4D250 179 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 MROH6A6NGR9 719 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 FAM47E-STBD1D6RA91 191 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 SOD2P04179 222 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 GTF2F1P35269 517 aaKnown RBP eCLIP5.22□□□□□ -1.57
NF1-213ENST00000489712 KIAA2012Q0VF49 1180 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 TMC5Q6UXY8 1006 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 MAMDC2Q7Z304 686 aaPredicted RBP5.22□□□□□ -1.57
NF1-213ENST00000489712 PRRT2Q7Z6L0 340 aaPredicted RBP5.22□□□□□ -1.57
NF1-213ENST00000489712 LGI4Q8N135 537 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 IPO9Q96P70 1041 aaKnown RBP5.22□□□□□ -1.57
NF1-213ENST00000489712 KCNJ15Q99712 375 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 L2HGDHQ9H9P8 463 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 PFDN2Q9UHV9 154 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 DUSP10Q9Y6W6 482 aa5.22□□□□□ -1.57
NF1-213ENST00000489712 C9orf118A6NHY6 69 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 K7ESM1 405 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 DDX3XO00571 662 aaKnown RBP eCLIP5.21□□□□□ -1.58
NF1-213ENST00000489712 AQP7O14520 342 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 ADCY3O60266 1144 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 CYP1A1P04798 512 aaPredicted RBP5.21□□□□□ -1.58
NF1-213ENST00000489712 SUMO1P63165 101 aaKnown RBP5.21□□□□□ -1.58
NF1-213ENST00000489712 EFEMP1Q12805 493 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 TUSC3Q13454 348 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 SPATS1Q496A3 300 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 MCTP2Q6DN12 878 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 VASNQ6EMK4 673 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 SCUBE1Q8IWY4 988 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 TXNDC5Q8NBS9 432 aaKnown RBP5.21□□□□□ -1.58
NF1-213ENST00000489712 LCORQ96JN0 433 aaPredicted RBP5.21□□□□□ -1.58
NF1-213ENST00000489712 HSPBP1Q9NZL4 362 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 CROTQ9UKG9 612 aa5.21□□□□□ -1.58
NF1-213ENST00000489712 TRBV23-1A0A0A0MS06 115 aa5.2□□□□□ -1.58
NF1-213ENST00000489712 ADRB1P08588 477 aa5.2□□□□□ -1.58
NF1-213ENST00000489712 ZNF827Q17R98 1081 aa5.2□□□□□ -1.58
NF1-213ENST00000489712 HABP4Q5JVS0 413 aaKnown RBP5.2□□□□□ -1.58
NF1-213ENST00000489712 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.2□□□□□ -1.58
NF1-213ENST00000489712 PLEKHH3Q7Z736 793 aa5.2□□□□□ -1.58
NF1-213ENST00000489712 MTDHQ86UE4 582 aaKnown RBP5.2□□□□□ -1.58
NF1-213ENST00000489712 BORCS6Q96GS4 357 aa5.2□□□□□ -1.58
NF1-213ENST00000489712 IPPKQ9H8X2 491 aa5.2□□□□□ -1.58
NF1-213ENST00000489712 DLL4Q9NR61 685 aa5.2□□□□□ -1.58
NF1-213ENST00000489712 FTSJ1Q9UET6 329 aa5.2□□□□□ -1.58
NF1-213ENST00000489712 DIAPH1O60610 1272 aaKnown RBP5.19□□□□□ -1.58
NF1-213ENST00000489712 PLATP00750 562 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 COL6A2P12110 1019 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 FAHP16930 419 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 NAT1P18440 290 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 IL13P35225 146 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 GRIN1Q05586 938 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 PAK1Q13153 545 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 SERINC3Q13530 473 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 RASA3Q14644 834 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 PAN2Q504Q3 1202 aaKnown RBP5.19□□□□□ -1.58
NF1-213ENST00000489712 TRMT10BQ6PF06 316 aaKnown RBP5.19□□□□□ -1.58
NF1-213ENST00000489712 KCTD1Q719H9 257 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 DTX3Q8N9I9 347 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 ZBTB38Q8NAP3 1195 aaPredicted RBP5.19□□□□□ -1.58
NF1-213ENST00000489712 ZCCHC14Q8WYQ9 949 aaKnown RBP5.19□□□□□ -1.58
NF1-213ENST00000489712 PTPRN2Q92932 1015 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 YTHDC1Q96MU7 727 aaKnown RBP5.19□□□□□ -1.58
NF1-213ENST00000489712 DEPDC7Q96QD5 511 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 TMEM168Q9H0V1 697 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 DSEQ9UL01 958 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 TRAF6Q9Y4K3 522 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 ASXL2Q76L83 1435 aa5.19□□□□□ -1.58
NF1-213ENST00000489712 NKRFO15226 690 aaKnown RBP eCLIP5.18□□□□□ -1.58
NF1-213ENST00000489712 LTFP02788 710 aa5.18□□□□□ -1.58
NF1-213ENST00000489712 ITGB3P05106 788 aa5.18□□□□□ -1.58
NF1-213ENST00000489712 MLLT6P55198 1093 aaPredicted RBP5.18□□□□□ -1.58
NF1-213ENST00000489712 SF3A1Q15459 793 aaKnown RBP5.18□□□□□ -1.58
NF1-213ENST00000489712 LRP10Q7Z4F1 713 aa5.18□□□□□ -1.58
NF1-213ENST00000489712 PROSER1Q86XN7 944 aa5.18□□□□□ -1.58
NF1-213ENST00000489712 RBM12BQ8IXT5 1001 aaKnown RBP5.18□□□□□ -1.58
NF1-213ENST00000489712 CLEC4DQ8WXI8 215 aa5.18□□□□□ -1.58
NF1-213ENST00000489712 PDGFDQ9GZP0 370 aaPredicted RBP5.18□□□□□ -1.58
NF1-213ENST00000489712 RBPJLQ9UBG7 517 aa5.18□□□□□ -1.58
NF1-213ENST00000489712 WASF3Q9UPY6 502 aa5.18□□□□□ -1.58
NF1-213ENST00000489712 INVSQ9Y283 1065 aa5.18□□□□□ -1.58
NF1-213ENST00000489712 WNT9AO14904 365 aa5.17□□□□□ -1.58
NF1-213ENST00000489712 C6orf222P0C671 652 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms