RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 TBX3O15119 743 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 CTAGE5O15320 804 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 STX6O43752 255 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 ATP9AO75110 1047 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 TDP2O95551 362 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 ANP32AP39687 249 aaKnown RBP18.09■□□□□ 0.49
HDAC7-224ENST00000488927 KCNA10Q16322 511 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 DGKDQ16760 1214 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 CCSAPQ6IQ19 270 aaPredicted RBP18.09■□□□□ 0.49
HDAC7-224ENST00000488927 BRAPQ7Z569 592 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 AFG1LQ8WV93 481 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 JPH1Q9HDC5 661 aaPredicted RBP18.09■□□□□ 0.49
HDAC7-224ENST00000488927 PHF24Q9UPV7 400 aa18.09■□□□□ 0.49
HDAC7-224ENST00000488927 BRCA2P51587 3418 aa18.08■□□□□ 0.49
HDAC7-224ENST00000488927 MYH7BA7E2Y1 1941 aa18.08■□□□□ 0.49
HDAC7-224ENST00000488927 FRMPD3Q5JV73 1810 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 MYADML2A6NDP7 307 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 PPFIA4O75335 1185 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 MMP3P08254 477 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 ACLYP53396 1101 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 BEX3Q00994 111 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 FAM20AQ96MK3 541 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 GLT1D1Q96MS3 346 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 RIT2Q99578 217 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 C11orf49Q9H6J7 331 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 PKD2L1Q9P0L9 805 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 SLC9A2Q9UBY0 812 aa18.08■□□□□ 0.48
HDAC7-224ENST00000488927 MSH4O15457 936 aa18.07■□□□□ 0.48
HDAC7-224ENST00000488927 BAG4O95429 457 aaKnown RBP18.07■□□□□ 0.48
HDAC7-224ENST00000488927 ASGR1P07306 291 aa18.07■□□□□ 0.48
HDAC7-224ENST00000488927 HOXD8P13378 290 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-224ENST00000488927 MNX1P50219 401 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-224ENST00000488927 ITGB3BPQ13352 177 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-224ENST00000488927 HSDL1Q3SXM5 330 aa18.07■□□□□ 0.48
HDAC7-224ENST00000488927 SLFN12Q8IYM2 578 aa18.07■□□□□ 0.48
HDAC7-224ENST00000488927 SPRYD3Q8NCJ5 442 aa18.07■□□□□ 0.48
HDAC7-224ENST00000488927 SLC5A5Q92911 643 aa18.07■□□□□ 0.48
HDAC7-224ENST00000488927 PAWRQ96IZ0 340 aaKnown RBP18.07■□□□□ 0.48
HDAC7-224ENST00000488927 SEZ6LQ9BYH1 1024 aa18.07■□□□□ 0.48
HDAC7-224ENST00000488927 ZSCAN16Q9H4T2 348 aaPredicted RBP18.07■□□□□ 0.48
HDAC7-224ENST00000488927 ELP1O95163 1332 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 SLC37A4O43826 429 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 MARCH6O60337 910 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 NEMFO60524 1076 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 GAS7O60861 476 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 COL6A1P12109 1028 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 PTGS1P23219 599 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 KRT76Q01546 638 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 TTC38Q5R3I4 469 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 UBE2Q1Q7Z7E8 422 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 ETNPPLQ8TBG4 499 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 SEPT1Q8WYJ6 367 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 GPR20Q99678 358 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 MTG1Q9BT17 334 aaPredicted RBP18.06■□□□□ 0.48
HDAC7-224ENST00000488927 TEKT3Q9BXF9 490 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 KCNMB3Q9NPA1 279 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 MTMR6Q9Y217 621 aa18.06■□□□□ 0.48
HDAC7-224ENST00000488927 A0A1W2PQ45 241 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-224ENST00000488927 A0A1W2PQY0 241 aa18.05■□□□□ 0.48
HDAC7-224ENST00000488927 DHX15O43143 795 aaKnown RBP18.05■□□□□ 0.48
HDAC7-224ENST00000488927 MYL3P08590 195 aa18.05■□□□□ 0.48
HDAC7-224ENST00000488927 ATP2B1P20020 1258 aa18.05■□□□□ 0.48
HDAC7-224ENST00000488927 PURAQ00577 322 aaKnown RBP18.05■□□□□ 0.48
HDAC7-224ENST00000488927 LRCH2Q5VUJ6 765 aa18.05■□□□□ 0.48
HDAC7-224ENST00000488927 ZNF746Q6NUN9 644 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-224ENST00000488927 SMAP1Q8IYB5 467 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-224ENST00000488927 DIS3LQ8TF46 1054 aaKnown RBP18.05■□□□□ 0.48
HDAC7-224ENST00000488927 KATNAL1Q9BW62 490 aa18.05■□□□□ 0.48
HDAC7-224ENST00000488927 SENP6Q9GZR1 1112 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-224ENST00000488927 STARD7Q9NQZ5 370 aa18.05■□□□□ 0.48
HDAC7-224ENST00000488927 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-224ENST00000488927 SORBS3O60504 671 aa18.04■□□□□ 0.48
HDAC7-224ENST00000488927 MCM7P33993 719 aa18.04■□□□□ 0.48
HDAC7-224ENST00000488927 IRX5P78411 483 aaPredicted RBP18.04■□□□□ 0.48
HDAC7-224ENST00000488927 CALCRLQ16602 461 aa18.04■□□□□ 0.48
HDAC7-224ENST00000488927 CXCL17Q6UXB2 119 aa18.04■□□□□ 0.48
HDAC7-224ENST00000488927 POTEDQ86YR6 584 aa18.04■□□□□ 0.48
HDAC7-224ENST00000488927 BCAS3Q9H6U6 928 aa18.04■□□□□ 0.48
HDAC7-224ENST00000488927 LAD1O00515 517 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 PSMD10O75832 226 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 SFNP31947 248 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 TCF7P36402 384 aaPredicted RBP18.03■□□□□ 0.48
HDAC7-224ENST00000488927 ACTR2P61160 394 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 SP4Q02446 784 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 C1orf53Q5VUE5 145 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 FERMT3Q86UX7 667 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 RDM1Q8NG50 284 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 FERMT2Q96AC1 680 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 VTI1AQ96AJ9 217 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 HTATIP2Q9BUP3 242 aa18.03■□□□□ 0.48
HDAC7-224ENST00000488927 ZNF215Q9UL58 517 aaPredicted RBP18.03■□□□□ 0.48
HDAC7-224ENST00000488927 A0A0U1RQG5 324 aaPredicted RBP18.02■□□□□ 0.48
HDAC7-224ENST00000488927 WDR64B1ANS9 1081 aa18.02■□□□□ 0.48
HDAC7-224ENST00000488927 DDX39AO00148 427 aaKnown RBP18.02■□□□□ 0.48
HDAC7-224ENST00000488927 ATG7O95352 703 aa18.02■□□□□ 0.48
HDAC7-224ENST00000488927 BMP15O95972 392 aa18.02■□□□□ 0.48
HDAC7-224ENST00000488927 F2P00734 622 aa18.02■□□□□ 0.48
HDAC7-224ENST00000488927 LGALS2P05162 132 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms