RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 DNERQ8NFT8 737 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 ZNF689Q96CS4 500 aaPredicted RBP17.98■□□□□ 0.47
U2AF1-211ENST00000486519 STX8Q9UNK0 236 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 MRPL42Q9Y6G3 142 aaKnown RBP17.98■□□□□ 0.47
U2AF1-211ENST00000486519 BAHCC1Q9P281 2608 aa17.98■□□□□ 0.47
U2AF1-211ENST00000486519 DOCK5Q9H7D0 1870 aa17.97■□□□□ 0.47
U2AF1-211ENST00000486519 FRYLO94915 3013 aa17.97■□□□□ 0.47
U2AF1-211ENST00000486519 M0R2C6 588 aa17.97■□□□□ 0.47
U2AF1-211ENST00000486519 TDO2P48775 406 aa17.97■□□□□ 0.47
U2AF1-211ENST00000486519 CLASRPQ8N2M8 674 aaKnown RBP17.97■□□□□ 0.47
U2AF1-211ENST00000486519 TAAR1Q96RJ0 339 aa17.97■□□□□ 0.47
U2AF1-211ENST00000486519 APOL5Q9BWW9 433 aa17.97■□□□□ 0.47
U2AF1-211ENST00000486519 GPCPD1Q9NPB8 672 aa17.97■□□□□ 0.47
U2AF1-211ENST00000486519 DDX41Q9UJV9 622 aaKnown RBP17.97■□□□□ 0.47
U2AF1-211ENST00000486519 RALYQ9UKM9 306 aaKnown RBP17.97■□□□□ 0.47
U2AF1-211ENST00000486519 SUPT16HQ9Y5B9 1047 aaKnown RBP17.97■□□□□ 0.47
U2AF1-211ENST00000486519 BTNL9Q6UXG8 535 aa17.96■□□□□ 0.47
U2AF1-211ENST00000486519 ZBTB33Q86T24 672 aa17.96■□□□□ 0.47
U2AF1-211ENST00000486519 POF1BQ8WVV4 589 aa17.96■□□□□ 0.47
U2AF1-211ENST00000486519 KATNAL1Q9BW62 490 aa17.96■□□□□ 0.47
U2AF1-211ENST00000486519 ATF7P17544 494 aaPredicted RBP17.95■□□□□ 0.46
U2AF1-211ENST00000486519 BTG3Q14201 252 aaPredicted RBP17.95■□□□□ 0.46
U2AF1-211ENST00000486519 CWF19L1Q69YN2 538 aaKnown RBP17.95■□□□□ 0.46
U2AF1-211ENST00000486519 ASTLQ6HA08 431 aaPredicted RBP17.95■□□□□ 0.46
U2AF1-211ENST00000486519 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
U2AF1-211ENST00000486519 KLHL23Q8NBE8 558 aa17.95■□□□□ 0.46
U2AF1-211ENST00000486519 PPTC7Q8NI37 304 aa17.95■□□□□ 0.46
U2AF1-211ENST00000486519 ATP8B4Q8TF62 1192 aa17.95■□□□□ 0.46
U2AF1-211ENST00000486519 ATP6V0A1Q93050 837 aa17.95■□□□□ 0.46
U2AF1-211ENST00000486519 CEP250Q9BV73 2442 aa17.95■□□□□ 0.46
U2AF1-211ENST00000486519 MAP1BP46821 2468 aaKnown RBP17.95■□□□□ 0.46
U2AF1-211ENST00000486519 GPAA1O43292 621 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 PI15O43692 258 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 HOXD8P13378 290 aaPredicted RBP17.94■□□□□ 0.46
U2AF1-211ENST00000486519 HOXC8P31273 242 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 HSDL1Q3SXM5 330 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 MCTP2Q6DN12 878 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 EMID1Q96A84 441 aaPredicted RBP17.94■□□□□ 0.46
U2AF1-211ENST00000486519 C16orf70Q9BSU1 422 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 S1PR5Q9H228 398 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 RWDD3Q9Y3V2 267 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 ACACBO00763 2458 aa17.94■□□□□ 0.46
U2AF1-211ENST00000486519 ZKSCAN2Q63HK3 967 aa17.93■□□□□ 0.46
U2AF1-211ENST00000486519 IFNL3Q8IZI9 196 aa17.93■□□□□ 0.46
U2AF1-211ENST00000486519 KIF1BPQ96EK5 621 aa17.93■□□□□ 0.46
U2AF1-211ENST00000486519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.93■□□□□ 0.46
U2AF1-211ENST00000486519 LOXHD1Q8IVV2 1947 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 C17orf102A2RUQ5 167 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 DGKIO75912 1065 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 SMIM10L2AP0DMW4 78 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 SMIM10L2BP0DMW5 78 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 GATMP50440 423 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 USH1GQ495M9 461 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 DCAF4Q8WV16 495 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 LINC01599Q8WXQ3 324 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 P2RX5Q93086 422 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 MPHOSPH6Q99547 160 aaKnown RBP17.92■□□□□ 0.46
U2AF1-211ENST00000486519 PLVAPQ9BX97 442 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 CPVLQ9H3G5 476 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 ZNF287Q9HBT7 754 aa17.92■□□□□ 0.46
U2AF1-211ENST00000486519 ENPP3O14638 875 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 PPFIA3O75145 1194 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 CHRNA1P02708 482 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 APPP05067 770 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 ASGR2P07307 311 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 GHRP10912 638 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 NOVP48745 357 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 CTDSPL2Q05D32 466 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 PPARAQ07869 468 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 PAN2Q504Q3 1202 aaKnown RBP17.91■□□□□ 0.46
U2AF1-211ENST00000486519 SYCE2Q6PIF2 218 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 SYTL5Q8TDW5 730 aaPredicted RBP17.91■□□□□ 0.46
U2AF1-211ENST00000486519 RNPEPQ9H4A4 650 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 TLE6Q9H808 572 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 TSHZ2Q9NRE2 1034 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 SPTBN2O15020 2390 aa17.91■□□□□ 0.46
U2AF1-211ENST00000486519 MYH6P13533 1939 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 C2CD4DB7Z1M9 353 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 LAMC2Q13753 1193 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 PUM1Q14671 1186 aaKnown RBP eCLIP17.9■□□□□ 0.46
U2AF1-211ENST00000486519 ZSCAN25Q6NSZ9 544 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 DCLK2Q8N568 766 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 APPBP2Q92624 585 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 APBB2Q92870 758 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 GPKOWQ92917 476 aaPredicted RBP eCLIP17.9■□□□□ 0.46
U2AF1-211ENST00000486519 PPP2R3CQ969Q6 453 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 SEC62Q99442 399 aaKnown RBP17.9■□□□□ 0.46
U2AF1-211ENST00000486519 DLL3Q9NYJ7 618 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 SORCS3Q9UPU3 1222 aa17.9■□□□□ 0.46
U2AF1-211ENST00000486519 TSPY2A6NKD2 308 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 EIF2AK2P19525 551 aaKnown RBP17.89■□□□□ 0.45
U2AF1-211ENST00000486519 SP2Q02086 613 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 MTMR3Q13615 1198 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 KCNC3Q14003 757 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 ANGPT1Q15389 498 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 FAM26DQ5JW98 314 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 MYSM1Q5VVJ2 828 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 SIRT2Q8IXJ6 389 aa17.89■□□□□ 0.45
U2AF1-211ENST00000486519 ZFP91Q96JP5 570 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms