RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MORC4Q8TE76 937 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 MZB1Q8WU39 189 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 DACT3Q96B18 629 aaPredicted RBP6□□□□□ -1.45
VPS13A-211ENST00000484581 CHMP4CQ96CF2 233 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 ZDHHC15Q96MV8 337 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 SMAD5Q99717 465 aaKnown RBP6□□□□□ -1.45
VPS13A-211ENST00000484581 ZFYVE21Q9BQ24 234 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 PLCD4Q9BRC7 762 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 DSCC1Q9BVC3 393 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 CDADC1Q9BWV3 514 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 CDH19Q9H159 772 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6□□□□□ -1.45
VPS13A-211ENST00000484581 GFOD1Q9NXC2 390 aa6□□□□□ -1.45
VPS13A-211ENST00000484581 GPR55Q9Y2T6 319 aaPredicted RBP6□□□□□ -1.45
VPS13A-211ENST00000484581 ASXL2Q76L83 1435 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 LOC102724159A0A0B4J2E5 919 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 FADS2P1A8MWK0 482 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 AKAP10O43572 662 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 CRTAMO95727 393 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 ECI1P42126 302 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 RAB27AP51159 221 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 CYP4F8P98187 520 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 RAB3GAP1Q15042 981 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 PWP2Q15269 919 aaKnown RBP5.99□□□□□ -1.45
VPS13A-211ENST00000484581 HSF5Q4G112 596 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-211ENST00000484581 ACBD5Q5T8D3 534 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-211ENST00000484581 ERICH6BQ5W0A0 696 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 CNKSR3Q6P9H4 555 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 RSPO2Q6UXX9 243 aaPredicted RBP5.99□□□□□ -1.45
VPS13A-211ENST00000484581 DDX53Q86TM3 631 aaKnown RBP5.99□□□□□ -1.45
VPS13A-211ENST00000484581 EXOC8Q8IYI6 725 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 WNK4Q96J92 1243 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 CAMKK2Q96RR4 588 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 ZIM2Q9NZV7 527 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 MINPP1Q9UNW1 487 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 TRAF6Q9Y4K3 522 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 SPEF1Q9Y4P9 236 aa5.99□□□□□ -1.45
VPS13A-211ENST00000484581 A0A1W2PQ27 194 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 A0A1W2PQ45 241 aaPredicted RBP5.98□□□□□ -1.45
VPS13A-211ENST00000484581 A0A1W2PQ64 194 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 A0A1W2PQC6 194 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 A0A1W2PQD8 194 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 A0A1W2PQY0 241 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 H0Y8X5 98 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 NEMP1O14524 444 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 VAMP4O75379 141 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 PRKCAP17252 672 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 SCNN1BP51168 640 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 CDR1P51861 262 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 POU4F1Q01851 419 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 SCRN1Q12765 414 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 HLTFQ14527 1009 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS13A-211ENST00000484581 LRRC41Q15345 812 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 TESK1Q15569 626 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 DENND5AQ6IQ26 1287 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 TMC6Q7Z403 805 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 MTDHQ86UE4 582 aaKnown RBP5.98□□□□□ -1.45
VPS13A-211ENST00000484581 ZBTB46Q86UZ6 589 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 PASD1Q8IV76 773 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 PPIL6Q8IXY8 311 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 CHPFQ8IZ52 775 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 MYO1HQ8N1T3 1032 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 CNTD1Q8N815 330 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 KREMEN2Q8NCW0 462 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 RTEL1Q9NZ71 1219 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 KLHL14Q9P2G3 628 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 TRHDEQ9UKU6 1024 aa5.98□□□□□ -1.45
VPS13A-211ENST00000484581 ARVCFO00192 962 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 CBX4O00257 560 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 CAND2O75155 1236 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 GSNP06396 782 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 BMP8BP34820 402 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 RHBDL3P58872 404 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 GPR85P60893 370 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 GUCY1A3Q02108 690 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 KIR3DS1Q14943 382 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 VMACQ2NL98 169 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 SYDE2Q5VT97 1194 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 LDHDQ86WU2 507 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 IFNL3Q8IZI9 196 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 NUP43Q8NFH3 380 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 NPLOC4Q8TAT6 608 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 CXorf38Q8TB03 319 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS13A-211ENST00000484581 PMM1Q92871 262 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 COPS5Q92905 334 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 HOOK2Q96ED9 719 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 YIPF4Q9BSR8 244 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 TRIM8Q9BZR9 551 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 XYLT2Q9H1B5 865 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 SAMD15Q9P1V8 674 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 PCDHA9Q9Y5H5 950 aa5.97□□□□□ -1.45
VPS13A-211ENST00000484581 OTOL1A6NHN0 477 aaPredicted RBP5.96□□□□□ -1.46
VPS13A-211ENST00000484581 NUDT19A8MXV4 375 aa5.96□□□□□ -1.46
VPS13A-211ENST00000484581 K7ESF4 209 aa5.96□□□□□ -1.46
VPS13A-211ENST00000484581 GABRDO14764 452 aa5.96□□□□□ -1.46
VPS13A-211ENST00000484581 PLIN1O60240 522 aa5.96□□□□□ -1.46
VPS13A-211ENST00000484581 EIF3JO75822 258 aaKnown RBP5.96□□□□□ -1.46
VPS13A-211ENST00000484581 GLRX3O76003 335 aaKnown RBP5.96□□□□□ -1.46
VPS13A-211ENST00000484581 PYGMP11217 842 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms