RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	GPR27	Q9NS67	375 aa		7.26	□□□□□ -1.25
PRKD3-208	ENST00000475912	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.26	□□□□□ -1.25
PRKD3-208	ENST00000475912	RAPGEFL1	Q9UHV5	662 aa		7.26	□□□□□ -1.25
PRKD3-208	ENST00000475912	PFDN2	Q9UHV9	154 aa		7.26	□□□□□ -1.25
PRKD3-208	ENST00000475912	CARMIL1	Q5VZK9	1371 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	BLACE	A4D250	179 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	SASH1	O94885	1247 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	CYP2C8	P10632	490 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	DLX2	Q07687	328 aa	Predicted RBP	7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	KCNT2	Q6UVM3	1135 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	SP8	Q8IXZ3	490 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	C20orf173	Q96LM9	149 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	SPATA9	Q9BWV2	254 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	XYLT2	Q9H1B5	865 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912	KIF27	Q86VH2	1401 aa		7.25	□□□□□ -1.25
PRKD3-208	ENST00000475912		A0A0G2JLL6	359 aa	Predicted RBP	7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	OTOL1	A6NHN0	477 aa	Predicted RBP	7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	SLURP1	P55000	103 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	CTSW	P56202	376 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	IFRD2	Q12894	506 aa	Predicted RBP	7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	SMAD4	Q13485	552 aa	Known RBP	7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	RASGRF1	Q13972	1273 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	MTERF2	Q49AM1	385 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	NBPF6	Q5VWK0	638 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	STEAP3	Q658P3	488 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	CD300LD	Q6UXZ3	194 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	ZNF669	Q96BR6	464 aa	Predicted RBP	7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	ZBTB8A	Q96BR9	441 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	NBPF4	Q96M43	638 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	GORASP1	Q9BQQ3	440 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	CDIP1	Q9H305	208 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	EPB41L1	Q9H4G0	881 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	LUC7L	Q9NQ29	371 aa	Known RBP	7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	ZNF652	Q9Y2D9	606 aa		7.24	□□□□□ -1.25
PRKD3-208	ENST00000475912	KIAA0556	O60303	1618 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	UGGT2	Q9NYU1	1516 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	RIMS1	Q86UR5	1692 aa	Known RBP	7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	KRTAP9-7	A8MTY7	169 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	HGS	O14964	777 aa	Predicted RBP	7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	RAPGEF3	O95398	923 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	STAT5A	P42229	794 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	CHRNA2	Q15822	529 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	LIPI	Q6XZB0	460 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	FAM126B	Q8IXS8	530 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	ZDHHC14	Q8IZN3	488 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	DCAF4	Q8WV16	495 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	JAM3	Q9BX67	310 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	CCDC113	Q9H0I3	377 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	SIRPG	Q9P1W8	387 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	FRMPD1	Q5SYB0	1578 aa		7.23	□□□□□ -1.25
PRKD3-208	ENST00000475912	SH3D21	A4FU49	640 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	ADCY3	O60266	1144 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	DGKI	O75912	1065 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	KCNC1	P48547	511 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	SSRP1	Q08945	709 aa	Known RBP	7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	EMC4	Q5J8M3	183 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	NPM2	Q86SE8	214 aa	Known RBP	7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	STK32C	Q86UX6	486 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	ZC3H18	Q86VM9	953 aa	Known RBP	7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	ARRDC4	Q8NCT1	418 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	SPATA25	Q9BR10	227 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	YIPF4	Q9BSR8	244 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	PCDHB4	Q9Y5E5	795 aa		7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	ARID4B	Q4LE39	1312 aa	Predicted RBP	7.22	□□□□□ -1.25
PRKD3-208	ENST00000475912	DIAPH1	O60610	1272 aa	Known RBP	7.21	□□□□□ -1.26
PRKD3-208	ENST00000475912	TADA3	O75528	432 aa		7.21	□□□□□ -1.26
PRKD3-208	ENST00000475912	SERINC3	Q13530	473 aa		7.21	□□□□□ -1.26
PRKD3-208	ENST00000475912	LBX2	Q6XYB7	198 aa		7.21	□□□□□ -1.26
PRKD3-208	ENST00000475912	LINC00482	Q8N8I6	264 aa		7.21	□□□□□ -1.26
PRKD3-208	ENST00000475912	ARMC5	Q96C12	935 aa		7.21	□□□□□ -1.26
PRKD3-208	ENST00000475912	TCRBV5S2	A0A599	114 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	GRK2	P25098	689 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	GRK3	P35626	688 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	CR1L	Q2VPA4	569 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	FOXB2	Q5VYV0	432 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	STYK1	Q6J9G0	422 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	CARF	Q8N187	725 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	PIP4K2C	Q8TBX8	421 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	C11orf84	Q9BUA3	381 aa	Predicted RBP	7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	MYOT	Q9UBF9	498 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	ABCA8	O94911	1581 aa		7.2	□□□□□ -1.26
PRKD3-208	ENST00000475912	ARHGEF40	Q8TER5	1519 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	SMARCA5	O60264	1052 aa	Predicted RBP	7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	GPR85	P60893	370 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	RBL2	Q08999	1139 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	RASA3	Q14644	834 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	KIZ	Q2M2Z5	673 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	CDC6	Q99741	560 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	ZFYVE21	Q9BQ24	234 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	ADAM7	Q9H2U9	754 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	PCDH18	Q9HCL0	1135 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	DTL	Q9NZJ0	730 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	NTM	Q9P121	344 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	TRAF6	Q9Y4K3	522 aa		7.19	□□□□□ -1.26
PRKD3-208	ENST00000475912	SIGLEC1	Q9BZZ2	1709 aa		7.18	□□□□□ -1.26
PRKD3-208	ENST00000475912	TRBV23-1	A0A0A0MS06	115 aa		7.18	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms