RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 RBM12BQ8IXT5 1001 aaKnown RBP6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 C2orf69Q8N8R5 385 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 UHMK1Q8TAS1 419 aaKnown RBP6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 SH3RF2Q8TEC5 729 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 FAM168AQ92567 244 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 ZNF552Q9H707 407 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 CABP5Q9NP86 173 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 B4GALT6Q9UBX8 382 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 PALD1Q9ULE6 856 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 NOP58Q9Y2X3 529 aaKnown RBP6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 ABLIM1O14639 778 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 SLC27A2O14975 620 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 MAFKO60675 156 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 MAPKAPK2P49137 400 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 SCNN1BP51168 640 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 NFKB2Q00653 900 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 SLC9A5Q14940 896 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 DHCR24Q15392 516 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 NXPE1Q8N323 547 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 AFAP1L2Q8N4X5 818 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 CHST14Q8NCH0 376 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 LIN37Q96GY3 246 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 FAM126AQ9BYI3 521 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 HCFC2Q9Y5Z7 792 aa6.96□□□□□ -1.3
HMGB1P26-201ENST00000452520 PTPDC1A2A3K4 754 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 MAN2B1O00754 1011 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 TMEM62Q0P6H9 643 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 SKOR2Q2VWA4 1001 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 MPZL3Q6UWV2 235 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 HHIPL2Q6UWX4 724 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 EP400NLQ6ZTU2 488 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 OTOP1Q7RTM1 612 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 TRIM48Q8IWZ4 208 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 NLGN4XQ8N0W4 816 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 PHOSPHO1Q8TCT1 267 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 CLEC4DQ8WXI8 215 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 MYOTQ9UBF9 498 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 ASH2LQ9UBL3 628 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 SRPK3Q9UPE1 567 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 ZNF652Q9Y2D9 606 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 ZKSCAN5Q9Y2L8 839 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 NUB1Q9Y5A7 615 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 PCDHB4Q9Y5E5 795 aa6.95□□□□□ -1.3
HMGB1P26-201ENST00000452520 TCRBV5S2A0A599 114 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 ZNF891A8MT65 544 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 KCNK3O14649 394 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 EYA4O95677 639 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 ZBTB48P10074 688 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 EPHA5P54756 1037 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 DSG1Q02413 1049 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 STRN3Q13033 797 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 TUSC3Q13454 348 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 PLEKHN1Q494U1 663 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 ZC3H14Q6PJT7 736 aaKnown RBP6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 OR2W6PQ8NHA6 318 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 TSPAN17Q96FV3 270 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 CD244Q9BZW8 370 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 PDGFDQ9GZP0 370 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 ATP8A1Q9Y2Q0 1164 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 TELO2Q9Y4R8 837 aa6.94□□□□□ -1.3
HMGB1P26-201ENST00000452520 SLC12A8A0AV02 714 aa6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 HRKO00198 91 aa6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 GAS7O60861 476 aa6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 ATP2A2P16615 1042 aaKnown RBP6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 YBX3P16989 372 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 TAL1P17542 331 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 SART3Q15020 963 aaKnown RBP6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 DDX42Q86XP3 938 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 ARRDC4Q8NCT1 418 aa6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 SMC1BQ8NDV3 1235 aa6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 METTL14Q9HCE5 456 aaKnown RBP6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 FAM53CQ9NYF3 392 aa6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 ATP23Q9Y6H3 246 aa6.93□□□□□ -1.3
HMGB1P26-201ENST00000452520 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 LTFP02788 710 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 CPEP16870 476 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 BPIP17213 487 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 VIPR1P32241 457 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 FIGNQ5HY92 759 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 PRR23BQ6ZRT6 265 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 ZNF605Q86T29 641 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 NOSTRINQ8IVI9 506 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 BOCQ9BWV1 1114 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 BCAS3Q9H6U6 928 aa6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P26-201ENST00000452520 FAM90A27PA6NNH2 459 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 SCDO00767 359 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 NEMP1O14524 444 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 GRIN1Q05586 938 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 SEC23AQ15436 765 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 BTBD8Q5XKL5 378 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 OLFML2BQ68BL8 750 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 FSTL4Q6MZW2 842 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 TMC6Q7Z403 805 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 ATL2Q8NHH9 583 aa6.91□□□□□ -1.3
HMGB1P26-201ENST00000452520 CHTF18Q8WVB6 975 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms