RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ZSCAN26Q16670 478 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 SPDYCQ5MJ68 293 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 ANKMY2Q8IV38 441 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 C7orf61Q8IZ16 206 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 DRAXINQ8NBI3 349 aaPredicted RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 GJA10Q969M2 543 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 NAF1Q96HR8 494 aaKnown RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 HIC2Q96JB3 615 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 ALPK1Q96QP1 1244 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 DNAJC7Q99615 494 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 SLC39A3Q9BRY0 314 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 BLOC1S4Q9NUP1 217 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 CTNNA3Q9UI47 895 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 MCM8Q9UJA3 840 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 PLAAQ9Y263 795 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 NOSIPQ9Y314 301 aaKnown RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 POLR2AP24928 1970 aaKnown RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 ITIH6Q6UXX5 1313 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 RAD50Q92878 1312 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 NUP98P52948 1817 aa6.24□□□□□ -1.41
RFC3-202ENST00000434425 MKI67P46013 3256 aaKnown RBP6.24□□□□□ -1.41
RFC3-202ENST00000434425 SNED1Q8TER0 1413 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 A0A1B0GVC2 190 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 M0QX08 132 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 PLOD2O00469 737 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 COBLO75128 1261 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 APBB3O95704 486 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 IGHA2P01877 340 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 GZMAP12544 262 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 ZSCAN20P17040 1043 aaPredicted RBP6.23□□□□□ -1.41
RFC3-202ENST00000434425 HOXD12P35452 270 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 CCT5P48643 541 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 RCAN1P53805 252 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 SH3BP2P78314 561 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 CTAG1AP78358 180 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 TNIP1Q15025 636 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 AGERQ15109 404 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 PLA2G2CQ5R387 149 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 CCDC122Q5T0U0 273 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 INTS11Q5TA45 600 aaKnown RBP6.23□□□□□ -1.41
RFC3-202ENST00000434425 FAM180BQ6P0A1 224 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 PACS1Q6VY07 963 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 SDCCAG8Q86SQ7 713 aaPredicted RBP6.23□□□□□ -1.41
RFC3-202ENST00000434425 SIX5Q8N196 739 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 GTF3C2Q8WUA4 911 aaPredicted RBP6.23□□□□□ -1.41
RFC3-202ENST00000434425 CHAC2Q8WUX2 184 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 ATP6V1E2Q96A05 226 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 SEC16BQ96JE7 1060 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 UTP14AQ9BVJ6 771 aaKnown RBP6.23□□□□□ -1.41
RFC3-202ENST00000434425 RHOBTB2Q9BYZ6 727 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 ATP6V0A4Q9HBG4 840 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 BRMS1Q9HCU9 246 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 ZNF304Q9HCX3 659 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 ZCCHC17Q9NP64 241 aaKnown RBP6.23□□□□□ -1.41
RFC3-202ENST00000434425 KCNQ5Q9NR82 932 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 MIS18AQ9NYP9 233 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 ZFATQ9P243 1243 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 NOD1Q9Y239 953 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 LEMD3Q9Y2U8 911 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 TLL2Q9Y6L7 1015 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 ERBB4Q15303 1308 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 CENPFP49454 3210 aa6.23□□□□□ -1.41
RFC3-202ENST00000434425 COL3A1P02461 1466 aaPredicted RBP6.22□□□□□ -1.41
RFC3-202ENST00000434425 TMCO5BA8MYB1 307 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 ATP5J2-PTCD1G3V325 749 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 ZBTB39O15060 712 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 RASA4O43374 803 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 LGR5O75473 907 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 RFPL1O75677 317 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 MTHFD1P11586 935 aaKnown RBP6.22□□□□□ -1.41
RFC3-202ENST00000434425 HARSP12081 509 aaKnown RBP6.22□□□□□ -1.41
RFC3-202ENST00000434425 CD9P21926 228 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 RPS6KB1P23443 525 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 PRKAR2BP31323 418 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 HSPA4P34932 840 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 MAP2K2P36507 400 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 CD86P42081 329 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 ECE1P42892 770 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 CASP7P55210 303 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 ACAP1Q15027 740 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 EML3Q32P44 896 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 MAP7D1Q3KQU3 841 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 CRY2Q49AN0 593 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 TM4SF20Q53R12 229 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 WDR44Q5JSH3 913 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 FAAH2Q6GMR7 532 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 CAPN12Q6ZSI9 719 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 USP50Q70EL3 339 aaPredicted RBP6.22□□□□□ -1.41
RFC3-202ENST00000434425 SAPCD2Q86UD0 394 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 TRIM74Q86UV6 250 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 TRIM73Q86UV7 250 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 TRIML1Q8N9V2 468 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 NAXEQ8NCW5 288 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 BICD2Q8TD16 824 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 FNIP1Q8TF40 1166 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 NUP133Q8WUM0 1156 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 USP6NLQ92738 828 aa6.22□□□□□ -1.41
RFC3-202ENST00000434425 RBM18Q96H35 190 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms