RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 NID2Q14112 1375 aa22.49■■□□□ 1.19
TSPAN4-209ENST00000409543 GRXCR1A8MXD5 290 aa22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 H3BRB1 525 aa22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 LGALS2P05162 132 aa22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 ITGB5P18084 799 aa22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 ADCY7P51828 1080 aa22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 DEFB128Q7Z7B8 93 aa22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 AFAP1L1Q8TED9 768 aa22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 DHX38Q92620 1227 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 TIFAQ96CG3 184 aa22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 CDX2Q99626 313 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 TUT1Q9H6E5 874 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-209ENST00000409543 TANC1Q9C0D5 1861 aa22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 SCN5AQ14524 2016 aa22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 SMCO2A6NFE2 343 aa22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 FOSP01100 380 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 PTK7Q13308 1070 aa22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 PFKFB3Q16875 520 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 PBX4Q9BYU1 374 aa22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 GLT8D2Q9H1C3 349 aa22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 ZSWIM6Q9HCJ5 1215 aa22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 SLC4A7Q9Y6M7 1214 aa22.47■■□□□ 1.19
TSPAN4-209ENST00000409543 MAFGO15525 162 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 ATP9AO75110 1047 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 ACTN1P12814 892 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 SELPP16109 830 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 KCNA2P16389 499 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 EVCP57679 992 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 MTMR1Q13613 665 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 RUFY3Q7L099 469 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 JADE2Q9NQC1 790 aa22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 TRIP12Q14669 1992 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-209ENST00000409543 DOCK5Q9H7D0 1870 aa22.45■■□□□ 1.19
TSPAN4-209ENST00000409543 PARNO95453 639 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 CKBP12277 381 aa22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 SCG2P13521 617 aa22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 PBX2P40425 430 aa22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 ZNF200P98182 395 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 HIC1Q14526 733 aa22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 RAB30Q15771 203 aa22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 LRRC8DQ7L1W4 858 aa22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 FTOQ9C0B1 505 aaKnown RBP eCLIP22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 MSRAQ9UJ68 235 aa22.45■■□□□ 1.18
TSPAN4-209ENST00000409543 ZBBXA8MT70 800 aa22.44■■□□□ 1.18
TSPAN4-209ENST00000409543 HOXC8P31273 242 aa22.44■■□□□ 1.18
TSPAN4-209ENST00000409543 CLK2P49760 499 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-209ENST00000409543 AP3B2Q13367 1082 aa22.44■■□□□ 1.18
TSPAN4-209ENST00000409543 TRIM71Q2Q1W2 868 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-209ENST00000409543 TM6SF1Q9BZW5 370 aa22.44■■□□□ 1.18
TSPAN4-209ENST00000409543 ZNF576Q9H609 170 aa22.44■■□□□ 1.18
TSPAN4-209ENST00000409543 TELO2Q9Y4R8 837 aa22.44■■□□□ 1.18
TSPAN4-209ENST00000409543 C17orf102A2RUQ5 167 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 PRPF3O43395 683 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 SMIM10L2AP0DMW4 78 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 SMIM10L2BP0DMW5 78 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 PDIA3P30101 505 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 SP4Q02446 784 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 GPNMBQ14956 572 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 SERINC5Q86VE9 423 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 MXRA8Q9BRK3 442 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 ANO3Q9BYT9 981 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 ZNF215Q9UL58 517 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 CYP46A1Q9Y6A2 500 aa22.43■■□□□ 1.18
TSPAN4-209ENST00000409543 ESYT2A0FGR8 921 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 NTRK3Q16288 839 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 PKN1Q16512 942 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 UTP14CQ5TAP6 766 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 MYLIPQ8WY64 445 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 SEPT1Q8WYJ6 367 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 ATP6V0A1Q93050 837 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 WNT8BQ93098 351 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 PGBD1Q96JS3 809 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 RNPEPQ9H4A4 650 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 TMEM260Q9NX78 707 aa22.42■■□□□ 1.18
TSPAN4-209ENST00000409543 BAIAP3O94812 1187 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 CENPBP07199 599 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 GNAT1P11488 350 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 ATP2A2P16615 1042 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 TCF7P36402 384 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 SREBF1P36956 1147 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 AKAP17AQ02040 695 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 TOB2Q14106 344 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 GRIN2CQ14957 1233 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 TRAF7Q6Q0C0 670 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 TRIM50Q86XT4 487 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 SLC17A8Q8NDX2 589 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 CCDC12Q8WUD4 166 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 PHKBQ93100 1093 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 RNF26Q9BY78 433 aaPredicted RBP22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 ZMYND12Q9H0C1 365 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 KCNH7Q9NS40 1196 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 PCDHA11Q9Y5I1 949 aa22.41■■□□□ 1.18
TSPAN4-209ENST00000409543 TET1Q8NFU7 2136 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 GSTTP1A0A1W2PQM5 241 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 CXCL10P02778 98 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 IFNAR1P17181 557 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 CEP55Q53EZ4 464 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 ZNF618Q5T7W0 954 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 MCTP2Q6DN12 878 aa22.4■■□□□ 1.18
TSPAN4-209ENST00000409543 CYP2W1Q8TAV3 490 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms