RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 EIF4A3P38919 411 aaKnown RBP11.95□□□□□ -0.5
CXCL12-203ENST00000374429 SOX10P56693 466 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 SPP2Q13103 211 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 CCDC181Q5TID7 509 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 TMEM139Q8IV31 216 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 RIOX1Q9H6W3 641 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 SH3GLB2Q9NR46 395 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 ABCA3Q99758 1704 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.95□□□□□ -0.5
CXCL12-203ENST00000374429 LRRC53A6NM62 1247 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 LRRN2O75325 713 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 MYBP10242 640 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 KIF5AQ12840 1032 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 MKRN3Q13064 507 aaKnown RBP11.95□□□□□ -0.5
CXCL12-203ENST00000374429 TTLL12Q14166 644 aaPredicted RBP11.95□□□□□ -0.5
CXCL12-203ENST00000374429 LRCH2Q5VUJ6 765 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 CATSPER3Q86XQ3 398 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 PARD6BQ9BYG5 372 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 ARHGEF10LQ9HCE6 1279 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 KBTBD4Q9NVX7 518 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 ABCC6O95255 1503 aa11.95□□□□□ -0.5
CXCL12-203ENST00000374429 BICDL2A1A5D9 508 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 TISP43B9A030 160 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 KIF2AO00139 706 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 FTCDO95954 541 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 NT5DC1Q5TFE4 455 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 FAM43BQ6ZT52 329 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 RAD54LQ92698 747 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 DYDC2Q96IM9 177 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 MYH7P12883 1935 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 EML1O00423 815 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 INPP5BP32019 993 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 CDKAL1Q5VV42 579 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 ZNF772Q68DY9 489 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 TMEM179Q6ZVK1 233 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 CCDC65Q8IXS2 484 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 GIMAP8Q8ND71 665 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 CCDC127Q96BQ5 260 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 HOOK2Q96ED9 719 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 IFIH1Q9BYX4 1025 aaKnown RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 RIC8AQ9NPQ8 531 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 ZNF70Q9UC06 446 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 SWAP70Q9UH65 585 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 GAKO14976 1311 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 RCCD1A6NED2 376 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 USO1O60763 962 aaKnown RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 ATP1A1P05023 1023 aaKnown RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 CASP4P49662 377 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 GABPAQ06546 454 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 TMTC1Q8IUR5 882 aa11.94□□□□□ -0.5
CXCL12-203ENST00000374429 NOA1Q8NC60 698 aaKnown RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 MYCBPQ99417 103 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-203ENST00000374429 IRS2Q9Y4H2 1338 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 PLCH1Q4KWH8 1693 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 FAM237AA0A1B0GTK4 181 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 CCDC169A6NNP5 214 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 TRIM49P0CI25 452 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 TRIM49CP0CI26 452 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 COG2Q14746 738 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 APTXQ7Z2E3 356 aaKnown RBP11.93□□□□□ -0.5
CXCL12-203ENST00000374429 SIAH1Q8IUQ4 282 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 ZDHHC15Q96MV8 337 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 CCSER1Q9C0I3 900 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 ZNF408Q9H9D4 720 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 CTAGE15A4D2H0 777 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 LGALS16A8MUM7 142 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 NFIBO00712 420 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 CTAGE8P0CG41 777 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 ARP10275 920 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 MAGEA1P43355 309 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 DNM2P50570 870 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 CXCL9Q07325 125 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 NAA35Q5VZE5 725 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 HHIPL2Q6UWX4 724 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 CTAGE6Q86UF2 777 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 CTAGE4Q8IX94 777 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 SNED1Q8TER0 1413 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 CCDC17Q96LX7 622 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 KIFC3Q9BVG8 833 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 C2orf54Q08AI8 447 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 SPATA20Q8TB22 786 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 NAPGQ99747 312 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-203ENST00000374429 REEP2Q9BRK0 252 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
CXCL12-203ENST00000374429 RHOBTB3O94955 611 aa11.92□□□□□ -0.5
CXCL12-203ENST00000374429 SLC9A1P19634 815 aa11.92□□□□□ -0.5
CXCL12-203ENST00000374429 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
CXCL12-203ENST00000374429 IFT81Q8WYA0 676 aa11.92□□□□□ -0.5
CXCL12-203ENST00000374429 PYM1Q9BRP8 204 aaKnown RBP11.92□□□□□ -0.5
CXCL12-203ENST00000374429 YY1AP1Q9H869 796 aa11.92□□□□□ -0.5
CXCL12-203ENST00000374429 CYLC1P35663 651 aaPredicted RBP11.92□□□□□ -0.5
CXCL12-203ENST00000374429 ODR4Q5SWX8 454 aa11.92□□□□□ -0.5
CXCL12-203ENST00000374429 MS4A14Q96JA4 679 aa11.92□□□□□ -0.5
CXCL12-203ENST00000374429 PPP1R16BQ96T49 567 aa11.92□□□□□ -0.5
CXCL12-203ENST00000374429 RUSC1Q9BVN2 902 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms