RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF652Q9Y2D9 606 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 ADGRA3Q8IWK6 1321 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 KIF24Q5T7B8 1368 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 KBTBD12Q3ZCT8 623 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 ARL10Q8N8L6 244 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 PRELID1Q9Y255 219 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 R3HDM2Q9Y2K5 976 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 RNF103-CHMP3A0A140T963 221 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 PJA2O43164 708 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 CCNT1O60563 726 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 TMPOP42166 694 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 YWHAEP62258 255 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 FCHO2Q0JRZ9 810 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 MICALL2Q8IY33 904 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 MSL3Q8N5Y2 521 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 TTLL3Q9Y4R7 772 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 REREQ9P2R6 1566 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 NFIBO00712 420 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 ZNF263O14978 683 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 HSPA1AP0DMV8 641 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 HSPA1BP0DMV9 641 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 CDH2P19022 906 aaPredicted RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 S100A1P23297 94 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 GGCXP38435 758 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 BSPRYQ5W0U4 402 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 RRAGAQ7L523 313 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 CYGBQ8WWM9 190 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 USP26Q9BXU7 913 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 ETNK1Q9HBU6 452 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 ABCF3Q9NUQ8 709 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 STOML2Q9UJZ1 356 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 TOP2BQ02880 1626 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 A0A0G2JND7 137 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 GNAT3A8MTJ3 354 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 NUP62P37198 522 aaPredicted RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 IL12RB1P42701 662 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 PLIN5Q00G26 463 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 NFE2L2Q16236 605 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 MCMDC2Q4G0Z9 681 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 ACAD11Q709F0 780 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 PATL1Q86TB9 770 aaKnown RBP6.63□□□□□ -1.35
VCAN-203ENST00000343200 EXOC7Q9UPT5 735 aa6.63□□□□□ -1.35
VCAN-203ENST00000343200 AXIN1O15169 862 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 AK2P54819 239 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 ZC3H12BQ5HYM0 836 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 KRT39Q6A163 491 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 KCNV2Q8TDN2 545 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 DNAJC9Q8WXX5 260 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 CCDC28BQ9BUN5 200 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 CASKIN1Q8WXD9 1431 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TARSL2A2RTX5 802 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 CHEK2O96017 543 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 P4HA1P13674 534 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TAB1Q15750 504 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 ADCK5Q3MIX3 580 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 ANO1Q5XXA6 986 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TRIM50Q86XT4 487 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 DCLK2Q8N568 766 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 MTRQ99707 1265 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TINF2Q9BSI4 451 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 FTOQ9C0B1 505 aaKnown RBP eCLIP6.62□□□□□ -1.35
VCAN-203ENST00000343200 EPB41L5Q9HCM4 733 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 USP40Q9NVE5 1235 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 ABCA5Q8WWZ7 1642 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 BTN3A3O00478 584 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 BIRC5O15392 142 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 IL10P22301 178 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 DNM2P50570 870 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 SLC20A2Q08357 652 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PDCLQ13371 301 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TP53BP2Q13625 1128 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 FBXW10Q5XX13 1052 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 TUBA3EQ6PEY2 450 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PDZD4Q76G19 769 aaPredicted RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 ARHGEF1Q92888 912 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 THOC1Q96FV9 657 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 FNBP1Q96RU3 617 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 EPAS1Q99814 870 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 SYNGAP1Q96PV0 1343 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 MEFVO15553 781 aaPredicted RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 N4BP1O75113 896 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 IFNA8P32881 189 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 MTTPP55157 894 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 LAMC2Q13753 1193 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 DMC1Q14565 340 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 KIF22Q14807 665 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 KHDRBS2Q5VWX1 349 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 ARMC3Q5W041 872 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 SPATA21Q7Z572 469 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 ZGPATQ8N5A5 531 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 DDI1Q8WTU0 396 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 GRAMD1AQ96CP6 724 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 PBKQ96KB5 322 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.35
VCAN-203ENST00000343200 TMOD4Q9NZQ9 345 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 SUN2Q9UH99 717 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 LIMA1Q9UHB6 759 aaKnown RBP6.62□□□□□ -1.35
VCAN-203ENST00000343200 SOX13Q9UN79 622 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 C9orf84Q5VXU9 1444 aa6.62□□□□□ -1.35
VCAN-203ENST00000343200 SLX4Q8IY92 1834 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms