RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 USP17L22D6RA61 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L17D6RBQ6 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L19D6RCP7 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L20D6RJB6 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 TLR2O60603 784 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 BBOX1O75936 387 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 NOL4O94818 638 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L24Q0WX57 530 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 USP17L6PQ6QN14 398 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 LRRC31Q6UY01 552 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 PROM2Q8N271 834 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 CERS5Q8N5B7 392 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 HYOU1Q9Y4L1 999 aa19.67■□□□□ 0.74
IFFO1-201ENST00000336604 NHSQ6T4R5 1651 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 TAF1LQ8IZX4 1826 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 RAD21O60216 631 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 PRLRP16471 622 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 SHMT1P34896 483 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 CCDC70Q6NSX1 233 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 AENQ8WTP8 325 aaKnown RBP19.66■□□□□ 0.74
IFFO1-201ENST00000336604 TLR10Q9BXR5 811 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 POTEB3A0JP26 581 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 POTECB2RU33 542 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 ZBTB5O15062 677 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 TCP1P17987 556 aaKnown RBP19.66■□□□□ 0.74
IFFO1-201ENST00000336604 SCNN1DP51172 638 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 MRPL12P52815 198 aaKnown RBP19.66■□□□□ 0.74
IFFO1-201ENST00000336604 NAP1L1P55209 391 aaKnown RBP19.66■□□□□ 0.74
IFFO1-201ENST00000336604 FAM83BQ5T0W9 1011 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 PPP1R18Q6NYC8 613 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 POTEBQ6S5H4 581 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 AFAP1L1Q8TED9 768 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 FAM184BQ9ULE4 1060 aa19.66■□□□□ 0.74
IFFO1-201ENST00000336604 POLR2FP61218 127 aaKnown RBP19.65■□□□□ 0.74
IFFO1-201ENST00000336604 CCDC181Q5TID7 509 aa19.65■□□□□ 0.74
IFFO1-201ENST00000336604 ZNF572Q7Z3I7 529 aaPredicted RBP19.65■□□□□ 0.74
IFFO1-201ENST00000336604 PJA2O43164 708 aa19.65■□□□□ 0.74
IFFO1-201ENST00000336604 ARID5AQ03989 594 aa19.65■□□□□ 0.74
IFFO1-201ENST00000336604 MS4A14Q96JA4 679 aa19.65■□□□□ 0.74
IFFO1-201ENST00000336604 BMP2KQ9NSY1 1161 aaPredicted RBP19.65■□□□□ 0.74
IFFO1-201ENST00000336604 USP40Q9NVE5 1235 aa19.65■□□□□ 0.74
IFFO1-201ENST00000336604 SSU72P8A0A1W2PR75 194 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 DNA2P51530 1060 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 KLHDC7AQ5VTJ3 777 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 SND1Q7KZF4 910 aaKnown RBP eCLIP19.64■□□□□ 0.73
IFFO1-201ENST00000336604 NOX5Q96PH1 765 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 LSM14BQ9BX40 385 aaKnown RBP19.64■□□□□ 0.73
IFFO1-201ENST00000336604 CEP72Q9P209 647 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 USP21Q9UK80 565 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 GOLGA6BA6NDN3 693 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 STAT3P40763 770 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 ITIH3Q06033 890 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 ENOX2Q16206 610 aaKnown RBP19.64■□□□□ 0.73
IFFO1-201ENST00000336604 SLC9C1Q4G0N8 1177 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 HERC4Q5GLZ8 1057 aaPredicted RBP19.64■□□□□ 0.73
IFFO1-201ENST00000336604 PCDHA2Q9Y5H9 948 aa19.64■□□□□ 0.73
IFFO1-201ENST00000336604 PLA2G4BP0C869 781 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 GPATCH4Q5T3I0 446 aaKnown RBP19.63■□□□□ 0.73
IFFO1-201ENST00000336604 SFMBT2Q5VUG0 894 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 GPBP1Q86WP2 473 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 SCFD1Q8WVM8 642 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 NT5C3AQ9H0P0 336 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 RBM12Q9NTZ6 932 aaKnown RBP19.63■□□□□ 0.73
IFFO1-201ENST00000336604 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.63■□□□□ 0.73
IFFO1-201ENST00000336604 LTBP4Q8N2S1 1624 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 SEPT2Q15019 361 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 SHROOM1Q2M3G4 852 aaPredicted RBP19.63■□□□□ 0.73
IFFO1-201ENST00000336604 HAUS3Q68CZ6 603 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 EDEM3Q9BZQ6 932 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 ZHX3Q9H4I2 956 aa19.63■□□□□ 0.73
IFFO1-201ENST00000336604 MYH7BA7E2Y1 1941 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 GCFC2P16383 781 aaKnown RBP19.62■□□□□ 0.73
IFFO1-201ENST00000336604 DDR1Q08345 913 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 NFIAQ12857 509 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 FOXR2Q6PJQ5 311 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 TRIM59Q8IWR1 403 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
IFFO1-201ENST00000336604 FAM196BA6NMK8 535 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 RBAK-RBAKDNI3L0D1 243 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 RPS6KA5O75582 802 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 HOXA10P31260 410 aaPredicted RBP19.62■□□□□ 0.73
IFFO1-201ENST00000336604 HYIQ5T013 277 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 CCDC65Q8IXS2 484 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 TBC1D5Q92609 795 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 STIM2Q9P246 746 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 SWAP70Q9UH65 585 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 KDM3AQ9Y4C1 1321 aa19.62■□□□□ 0.73
IFFO1-201ENST00000336604 POTEFA5A3E0 1075 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 SERPING1P05155 500 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 POTEIP0CG38 1075 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 ADRA2BP18089 450 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 CYP11B2P19099 503 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 PAFAH1B1P43034 410 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 RAPGEF1Q13905 1077 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 POTEGQ6S5H5 508 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 POTEEQ6S8J3 1075 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 KCTD10Q9H3F6 313 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 EMILIN3Q9NT22 766 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 QRICH1Q2TAL8 776 aa19.61■□□□□ 0.73
IFFO1-201ENST00000336604 CDC42EP5Q6NZY7 148 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms