RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 NXF1Q9UBU9 619 aaKnown RBP18.4■□□□□ 0.54
LMNB2-201ENST00000325327 PGK2P07205 417 aa18.4■□□□□ 0.54
LMNB2-201ENST00000325327 PRELPP51888 382 aa18.4■□□□□ 0.54
LMNB2-201ENST00000325327 ZNF445P59923 1031 aa18.4■□□□□ 0.54
LMNB2-201ENST00000325327 PADI6Q6TGC4 694 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 PAGE5Q96GU1 130 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 RIC8AQ9NPQ8 531 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 MAGEA1P43355 309 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 POLR2FP61218 127 aaKnown RBP18.39■□□□□ 0.53
LMNB2-201ENST00000325327 CRY2Q49AN0 593 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 UPF1Q92900 1129 aaKnown RBP eCLIP18.39■□□□□ 0.538e-19■■■■■ 57.6
LMNB2-201ENST00000325327 GPRC5DQ9NZD1 345 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 MKRN1Q9UHC7 482 aaKnown RBP18.39■□□□□ 0.53
LMNB2-201ENST00000325327 TCRBV5S4A2TA0A5A2 114 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 CUL4BQ13620 913 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 CTTNBP2NLQ9P2B4 639 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 NRXN3Q9Y4C0 1643 aa18.39■□□□□ 0.53
LMNB2-201ENST00000325327 KRT76Q01546 638 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 DPF2Q92785 391 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 CNOT6LQ96LI5 555 aaKnown RBP18.38■□□□□ 0.53
LMNB2-201ENST00000325327 FAM20AQ96MK3 541 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 NOX5Q96PH1 765 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 C1orf112Q9NSG2 853 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 LRFN2Q9ULH4 789 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 INPP5FQ9Y2H2 1132 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 SHTN1A0MZ66 631 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 QARSP47897 775 aaKnown RBP18.38■□□□□ 0.53
LMNB2-201ENST00000325327 TRPM4Q8TD43 1214 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 LXNQ9BS40 222 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 CUEDC2Q9H467 287 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 SPATA1Q5VX52 437 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 SYT10Q6XYQ8 523 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 C11orf57Q6ZUT1 292 aaPredicted RBP18.38■□□□□ 0.53
LMNB2-201ENST00000325327 RHPN2Q8IUC4 686 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 FAM186BQ8IYM0 893 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.38■□□□□ 0.53
LMNB2-201ENST00000325327 ZNF302Q9NR11 478 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 KMT5BQ4FZB7 885 aa18.38■□□□□ 0.53
LMNB2-201ENST00000325327 C7orf31Q8N865 590 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 GOLGA5Q8TBA6 731 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 TUBGCP2Q9BSJ2 902 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 MAN1B1Q9UKM7 699 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.531e-6■■■□□ 15.4
LMNB2-201ENST00000325327 NALCNQ8IZF0 1738 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 SHMT1P34896 483 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 STAT1P42224 750 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 GSTA5Q7RTV2 222 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 IGSF3O75054 1194 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 VCAM1P19320 739 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 EVX2Q03828 476 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 SPECC1LQ69YQ0 1117 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 TRIML1Q8N9V2 468 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 ANAPC4Q9UJX5 808 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 SLC16A4O15374 487 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 LRRN2O75325 713 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 JAK3P52333 1124 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 ARPP19P56211 112 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 FKBP3Q00688 224 aaKnown RBP18.37■□□□□ 0.53
LMNB2-201ENST00000325327 FAM83AQ86UY5 434 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 GAS2L3Q86XJ1 694 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 TAAR1Q96RJ0 339 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 MED10Q9BTT4 135 aa18.37■□□□□ 0.53
LMNB2-201ENST00000325327 NAA15Q9BXJ9 866 aaKnown RBP18.37■□□□□ 0.53
LMNB2-201ENST00000325327 ASB14A6NK59 587 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 IFFO1Q0D2I5 559 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 GBP6Q6ZN66 633 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 P2RX5Q93086 422 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 ACCSQ96QU6 501 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 SAMSN1Q9NSI8 373 aaKnown RBP18.36■□□□□ 0.53
LMNB2-201ENST00000325327 BCCIPQ9P287 314 aaKnown RBP eCLIP18.36■□□□□ 0.53
LMNB2-201ENST00000325327 SLIT3O75094 1523 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 LPXNO60711 386 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 VIL1P09327 827 aaKnown RBP18.36■□□□□ 0.53
LMNB2-201ENST00000325327 FDPSP14324 419 aaKnown RBP18.36■□□□□ 0.53
LMNB2-201ENST00000325327 SFMBT2Q5VUG0 894 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 VWA3BQ502W6 1294 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 TWF2Q6IBS0 349 aaKnown RBP18.36■□□□□ 0.53
LMNB2-201ENST00000325327 PPP1R18Q6NYC8 613 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 ZNF771Q7L3S4 317 aaPredicted RBP18.36■□□□□ 0.53
LMNB2-201ENST00000325327 NBPF11Q86T75 865 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 FERMT1Q9BQL6 677 aa18.36■□□□□ 0.53
LMNB2-201ENST00000325327 GOLGA6L10A0A0M3HER8 536 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 LMBR1Q8WVP7 490 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 SLC9A2Q9UBY0 812 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 HPS5Q9UPZ3 1129 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 PCDHA10Q9Y5I2 948 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 P4HBP07237 508 aaKnown RBP18.35■□□□□ 0.53
LMNB2-201ENST00000325327 USP49Q70CQ1 688 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 JPH1Q9HDC5 661 aaPredicted RBP18.35■□□□□ 0.53
LMNB2-201ENST00000325327 PRDM5Q9NQX1 630 aaPredicted RBP18.35■□□□□ 0.53
LMNB2-201ENST00000325327 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 ZDHHC9Q9Y397 364 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 GAP43P17677 238 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 OR6J1Q8NGC5 347 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 U2AF1L4Q8WU68 220 aaKnown RBP18.35■□□□□ 0.53
LMNB2-201ENST00000325327 CDCA5Q96FF9 252 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
LMNB2-201ENST00000325327 STXBP3O00186 592 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms