RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TAF3Q5VWG9 929 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 EXOC4Q96A65 974 aa19.26■□□□□ 0.67
COL9A1-201ENST00000320755 PURBQ96QR8 312 aaKnown RBP19.26■□□□□ 0.67
COL9A1-201ENST00000320755 TAF1LQ8IZX4 1826 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 CCDC181Q5TID7 509 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 ANO9A1A5B4 782 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 GDF11O95390 407 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 PSMD2Q13200 908 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 PDXDC1Q6P996 788 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 ZNF662Q6ZS27 426 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 CREG2Q8IUH2 290 aa19.25■□□□□ 0.67
COL9A1-201ENST00000320755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.25■□□□□ 0.67
COL9A1-201ENST00000320755 HNRNPH3P31942 346 aaKnown RBP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 EPS15P42566 896 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 EHHADHQ08426 723 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 SLFN13Q68D06 897 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 CCDC65Q8IXS2 484 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 ALS2CR12Q96Q35 445 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 LRRC1Q9BTT6 524 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 ANO3Q9BYT9 981 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 PLIN4Q96Q06 1357 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 MED24O75448 989 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 RNASE9P60153 205 aaKnown RBP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 PSMC6P62333 389 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 PABPC4Q13310 644 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 RAPGEF1Q13905 1077 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 SEPT2Q15019 361 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 CDC37Q16543 378 aaPredicted RBP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 FAM83BQ5T0W9 1011 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL9A1-201ENST00000320755 ACBD3Q9H3P7 528 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 DNAJC18Q9H819 358 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 EMILIN3Q9NT22 766 aa19.24■□□□□ 0.67
COL9A1-201ENST00000320755 DDTLA6NHG4 134 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 CRKP46108 304 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 ADAM9Q13443 819 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 MAP9Q49MG5 647 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 CERKLQ49MI3 558 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 MTMR8Q96EF0 704 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 OSBPL9Q96SU4 736 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 DMGDHQ9UI17 866 aaKnown RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 CYP4A11Q02928 519 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 SAMD1Q6SPF0 538 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 MS4A14Q96JA4 679 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 NT5C3AQ9H0P0 336 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 FAM204AQ9H8W3 233 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 AFF2P51816 1311 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 MYH7BA7E2Y1 1941 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 SFMBT2Q5VUG0 894 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 PPP1R18Q6NYC8 613 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 SLC30A10Q6XR72 485 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 RPGRIP1Q96KN7 1286 aa19.23■□□□□ 0.67
COL9A1-201ENST00000320755 TMX4Q9H1E5 349 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-201ENST00000320755 RNF40O75150 1001 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 CCDC70Q6NSX1 233 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 SCFD1Q8WVM8 642 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 TBC1D5Q92609 795 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 NHSQ6T4R5 1651 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 TLR2O60603 784 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 CYP11B2P19099 503 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 HOXA13P31271 388 aaPredicted RBP19.22■□□□□ 0.67
COL9A1-201ENST00000320755 SLC9C1Q4G0N8 1177 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 ZCWPW2Q504Y3 356 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 CCNI2Q6ZMN8 369 aaPredicted RBP19.22■□□□□ 0.67
COL9A1-201ENST00000320755 SPATA4Q8NEY3 305 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 SELENOOQ9BVL4 669 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 BCAS3Q9H6U6 928 aa19.22■□□□□ 0.67
COL9A1-201ENST00000320755 FAM170AA1A519 330 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 NOL4O94818 638 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 GCFC2P16383 781 aaKnown RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 CASP5P51878 434 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 PTPROQ16827 1216 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 HGSNATQ68CP4 663 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 IQCEQ6IPM2 695 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 DNAAF5Q86Y56 855 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 FAM133AQ8N9E0 248 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 FAM71BQ8TC56 605 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 IQCDQ96DY2 449 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 P2RX7Q99572 595 aaKnown RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 ADAMTS1Q9UHI8 967 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 HPCAL4Q9UM19 191 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 ATF5Q9Y2D1 282 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 ACTN1P12814 892 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 MCM3P25205 808 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 SPICE1Q8N0Z3 855 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 PROM2Q8N271 834 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 FTCDO95954 541 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 GGCXP38435 758 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 ARSHQ5FYA8 562 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 NOX5Q96PH1 765 aa19.21■□□□□ 0.67
COL9A1-201ENST00000320755 PACSIN2Q9UNF0 486 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-201ENST00000320755 KDM3AQ9Y4C1 1321 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 ARHGAP4P98171 946 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 MSL1Q68DK7 614 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 SND1Q7KZF4 910 aaKnown RBP eCLIP19.2■□□□□ 0.66
COL9A1-201ENST00000320755 CATSPER3Q86XQ3 398 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 GOLGA6L1Q8N7Z2 621 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 CYP2W1Q8TAV3 490 aa19.2■□□□□ 0.66
COL9A1-201ENST00000320755 HYOU1Q9Y4L1 999 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms