RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 CSGALNACT2Q8N6G5 542 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 PANK4Q9NVE7 773 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 SSBP05455 408 aaKnown RBP eCLIP23.79■■□□□ 1.4
GFRA3-201ENST00000274721 ITGB5P18084 799 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 DSG3P32926 999 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 FOXR2Q6PJQ5 311 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 NIPA1Q7RTP0 329 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 GPBP1Q86WP2 473 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 PCDHA2Q9Y5H9 948 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 ITIH6Q6UXX5 1313 aa23.79■■□□□ 1.4
GFRA3-201ENST00000274721 NRDCO43847 1150 aa23.78■■□□□ 1.4
GFRA3-201ENST00000274721 OAZ1P54368 228 aa23.78■■□□□ 1.4
GFRA3-201ENST00000274721 RPS6P62753 249 aaKnown RBP23.78■■□□□ 1.4
GFRA3-201ENST00000274721 COG2Q14746 738 aa23.78■■□□□ 1.4
GFRA3-201ENST00000274721 CATSPERGQ6ZRH7 1159 aa23.78■■□□□ 1.4
GFRA3-201ENST00000274721 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.78■■□□□ 1.4
GFRA3-201ENST00000274721 KRT26Q7Z3Y9 468 aa23.78■■□□□ 1.4
GFRA3-201ENST00000274721 TMEM139Q8IV31 216 aa23.78■■□□□ 1.4
GFRA3-201ENST00000274721 TRERF1Q96PN7 1200 aa23.78■■□□□ 1.4
GFRA3-201ENST00000274721 HOMER2Q9NSB8 354 aa23.78■■□□□ 1.4
GFRA3-201ENST00000274721 CTDP1Q9Y5B0 961 aaPredicted RBP23.78■■□□□ 1.4
GFRA3-201ENST00000274721 SH3D19Q5HYK7 790 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 C9orf131Q5VYM1 1079 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 PCNX4Q63HM2 1172 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 SLC30A10Q6XR72 485 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 ZFP91Q96JP5 570 aaPredicted RBP23.77■■□□□ 1.4
GFRA3-201ENST00000274721 RIT2Q99578 217 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 ZNF577Q9BSK1 485 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 WDR11Q9BZH6 1224 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 VPS16Q9H269 839 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 TUFT1Q9NNX1 390 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 TAB2Q9NYJ8 693 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 GAS7O60861 476 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 SLITRK3O94933 977 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 GOLGA8FQ08AF8 430 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 GOLGA8DPQ0D2H9 430 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 DNTTIP2Q5QJE6 756 aaKnown RBP23.77■■□□□ 1.4
GFRA3-201ENST00000274721 CCDC65Q8IXS2 484 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 CCAR2Q8N163 923 aaKnown RBP23.77■■□□□ 1.4
GFRA3-201ENST00000274721 IL31RAQ8NI17 732 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 DCPSQ96C86 337 aaKnown RBP23.77■■□□□ 1.4
GFRA3-201ENST00000274721 RGL1Q9NZL6 768 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 RIPK3Q9Y572 518 aa23.77■■□□□ 1.4
GFRA3-201ENST00000274721 IPO5O00410 1097 aaKnown RBP23.76■■□□□ 1.39
GFRA3-201ENST00000274721 MUTP22033 750 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 MAP3K9P80192 1104 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 CYP4A11Q02928 519 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 FAM26FQ5R3K3 315 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 E4F1Q66K89 784 aaPredicted RBP23.76■■□□□ 1.39
GFRA3-201ENST00000274721 DLK2Q6UY11 383 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 ZNF214Q9UL59 606 aaPredicted RBP23.76■■□□□ 1.39
GFRA3-201ENST00000274721 UBIAD1Q9Y5Z9 338 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 SNCAIPQ9Y6H5 919 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 USP27XA6NNY8 438 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 ATP2A1O14983 1001 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 TERF1P54274 439 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 MRPS9P82933 396 aaKnown RBP23.76■■□□□ 1.39
GFRA3-201ENST00000274721 PABPC4Q13310 644 aaKnown RBP eCLIP23.76■■□□□ 1.39
GFRA3-201ENST00000274721 PRKG1Q13976 671 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 GLIS3Q8NEA6 775 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 RBM46Q8TBY0 533 aaKnown RBP23.76■■□□□ 1.39
GFRA3-201ENST00000274721 ZNF507Q8TCN5 953 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 TAAR1Q96RJ0 339 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 KCNH7Q9NS40 1196 aa23.76■■□□□ 1.39
GFRA3-201ENST00000274721 NPHP3-ACAD11A0A0J9YXS1 232 aa23.75■■□□□ 1.39
GFRA3-201ENST00000274721 EYA4O95677 639 aa23.75■■□□□ 1.39
GFRA3-201ENST00000274721 ADKP55263 362 aaKnown RBP23.75■■□□□ 1.39
GFRA3-201ENST00000274721 LRRC63Q05C16 580 aa23.75■■□□□ 1.39
GFRA3-201ENST00000274721 VGLL4Q14135 290 aa23.75■■□□□ 1.39
GFRA3-201ENST00000274721 GIT2Q14161 759 aa23.75■■□□□ 1.39
GFRA3-201ENST00000274721 SULF1Q8IWU6 871 aa23.75■■□□□ 1.39
GFRA3-201ENST00000274721 TMOD4Q9NZQ9 345 aa23.75■■□□□ 1.39
GFRA3-201ENST00000274721 R3HCC1Q9Y3T6 440 aaKnown RBP23.75■■□□□ 1.39
GFRA3-201ENST00000274721 RNF207Q6ZRF8 634 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 FAM114A1Q8IWE2 563 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 MYOCDQ8IZQ8 938 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 COL11A1P12107 1806 aaPredicted RBP23.74■■□□□ 1.39
GFRA3-201ENST00000274721 LGALS16A8MUM7 142 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 RBL2Q08999 1139 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 EPHA7Q15375 998 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 CREBRFQ8IUR6 639 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 L3MBTL3Q96JM7 780 aaPredicted RBP23.74■■□□□ 1.39
GFRA3-201ENST00000274721 TEKT3Q9BXF9 490 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 UNC45AQ9H3U1 944 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 JADE2Q9NQC1 790 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 RNF146Q9NTX7 359 aa23.74■■□□□ 1.39
GFRA3-201ENST00000274721 MAGEC2Q9UBF1 373 aaPredicted RBP23.74■■□□□ 1.39
GFRA3-201ENST00000274721 RBBP6Q7Z6E9 1792 aaKnown RBP23.74■■□□□ 1.39
GFRA3-201ENST00000274721 MYPNQ86TC9 1320 aa23.73■■□□□ 1.39
GFRA3-201ENST00000274721 AKR1B15C9JRZ8 316 aaPredicted RBP23.73■■□□□ 1.39
GFRA3-201ENST00000274721 ADM5C9JUS6 153 aa23.73■■□□□ 1.39
GFRA3-201ENST00000274721 DHX15O43143 795 aaKnown RBP23.73■■□□□ 1.39
GFRA3-201ENST00000274721 STX10O60499 249 aa23.73■■□□□ 1.39
GFRA3-201ENST00000274721 CTTNQ14247 550 aaKnown RBP23.73■■□□□ 1.39
GFRA3-201ENST00000274721 PGM5Q15124 567 aa23.73■■□□□ 1.39
GFRA3-201ENST00000274721 LRRC41Q15345 812 aa23.73■■□□□ 1.39
GFRA3-201ENST00000274721 TKFCQ3LXA3 575 aa23.73■■□□□ 1.39
GFRA3-201ENST00000274721 HERC4Q5GLZ8 1057 aaPredicted RBP23.73■■□□□ 1.39
GFRA3-201ENST00000274721 CEP135Q66GS9 1140 aa23.73■■□□□ 1.39
GFRA3-201ENST00000274721 DYDC2Q96IM9 177 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms