RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Tnnc1P19123 161 aa16.48■□□□□ 0.23
Nup54-201ENSMUST00000038514 Asap3Q5U464 904 aa16.48■□□□□ 0.23
Nup54-201ENSMUST00000038514 DaglaQ6WQJ1 1044 aa16.48■□□□□ 0.23
Nup54-201ENSMUST00000038514 Naa15Q80UM3 865 aaKnown RBP16.48■□□□□ 0.23
Nup54-201ENSMUST00000038514 Usp38Q8BW70 1042 aa16.48■□□□□ 0.23
Nup54-201ENSMUST00000038514 Asic2Q925H0 512 aa16.48■□□□□ 0.23
Nup54-201ENSMUST00000038514 KynuQ9CXF0 464 aa16.48■□□□□ 0.23
Nup54-201ENSMUST00000038514 Jag1Q9QXX0 1218 aa16.48■□□□□ 0.23
Nup54-201ENSMUST00000038514 Tcerg1lQ3B807 590 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Agxt2Q3UEG6 513 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Pla2g4eQ50L42 875 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Dennd2aQ8C4S8 1000 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Il17cQ8K4C5 194 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Sgms1Q8VCQ6 419 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Ndufab1Q9CR21 156 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Capn9Q9D805 690 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Usp14Q9JMA1 493 aaKnown RBP16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Tex21Q9R0U9 575 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Scn9aQ62205 1984 aa16.47■□□□□ 0.23
Nup54-201ENSMUST00000038514 Pja1O55176 578 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Rnaseh1O70338 285 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Gap43P06837 227 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Lmnb2P21619 596 aaKnown RBP16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Hspa9P38647 679 aaKnown RBP16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Nedd4P46935 887 aaKnown RBP16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 PltpP55065 493 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Nsun7Q14AW5 724 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Nhej1Q3KNJ2 295 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Arid3aQ62431 601 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Erlin2Q8BFZ9 340 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 GopcQ8BH60 463 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Q8BT18 775 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 AagabQ8R2R3 316 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Vwa5aQ99KC8 793 aaKnown RBP16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Kif17Q99PW8 1038 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 MycbpQ9EQS3 103 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Vmn2r79E9Q067 851 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Becn2P0DM65 447 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Tal1P22091 329 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Fam183bQ5NC57 135 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Ccpg1Q640L3 753 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Atxn2lQ7TQH0 1049 aaKnown RBP16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Tmx4Q8C0L0 335 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Cacnb1Q8R3Z5 597 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Mtmr4Q91XS1 1190 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Hps4Q99KG7 671 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Lztr1Q9CQ33 837 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Psrc1Q9D0P7 329 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Saal1Q9D2C2 474 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Klc4Q9DBS5 619 aa16.46■□□□□ 0.23
Nup54-201ENSMUST00000038514 Grem2O88273 168 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 FechP22315 420 aaKnown RBP16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Usp4P35123 962 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Hps5P59438 1126 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 AsnsQ61024 561 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Npdc1Q64322 332 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Krt9Q6RHW0 743 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 SugctQ7TNE1 436 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Klhl7Q8BUL5 586 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Cgref1Q8R1U2 281 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Trmt44Q9D2Q2 713 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 ArcQ9WV31 396 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Gm28510A0A087WP28 240 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Apol10bG3X9K7 334 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Vmn2r68L7N2B3 851 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Pgrmc1O55022 195 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Sema3eP70275 775 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Slc30a9Q5IRJ6 567 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Stxbp3Q60770 592 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Olfr832Q7TRG9 312 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ublcp1Q8BGR9 318 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Bola2Q8BGS2 86 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Znf771Q8BJ90 317 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Csgalnact2Q8C1F4 542 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ccdc87Q8CDL9 855 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Tesk2Q8VCT9 570 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 GgcxQ9QYC7 757 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 Slfn14V9GXG1 899 aa16.45■□□□□ 0.22
Nup54-201ENSMUST00000038514 ProcP33587 460 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Fam178bQ24JP3 464 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Lrig2Q52KR2 1054 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Zbtb39Q6PDK0 712 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Naa35Q6PHQ8 725 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 March6Q6ZQ89 909 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Zic5Q7TQ40 622 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rassf2Q8BMS9 326 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ppp1r3aQ99MR9 1089 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Dydc1Q9D9T0 175 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Guca2bO09051 106 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Eif6O55135 245 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Trim43cP86449 446 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ppp1r1bQ60829 194 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Glra4Q61603 456 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Actn1Q7TPR4 892 aaKnown RBP16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ankrd13aQ80UP5 588 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 PccaQ91ZA3 724 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Rexo2Q9D8S4 237 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Znf287Q9EQB9 759 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Tmem191cQ9JJB1 302 aa16.44■□□□□ 0.22
Nup54-201ENSMUST00000038514 Ddx25Q9QY15 484 aa16.44■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms