Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Gm25239-201ENSMUST00000174915 86 ntBASIC39.47■■■■□ 3.91
Sgms1Q8VCQ6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
Sgms1Q8VCQ6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Sgms1Q8VCQ6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
Sgms1Q8VCQ6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.3■■■■□ 3.4
Sgms1Q8VCQ6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Sgms1Q8VCQ6 Gm15042-201ENSMUST00000120212 883 ntBASIC35.17■■■■□ 3.22
Sgms1Q8VCQ6 Psd-208ENSMUST00000224556 2034 ntBASIC34.97■■■■□ 3.19
Sgms1Q8VCQ6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Sgms1Q8VCQ6 Gm15045-201ENSMUST00000117359 883 ntBASIC34.55■■■■□ 3.12
Sgms1Q8VCQ6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Sgms1Q8VCQ6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Sgms1Q8VCQ6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.11■■■■□ 3.05
Sgms1Q8VCQ6 Gm24109-201ENSMUST00000175489 103 ntBASIC34.1■■■■□ 3.05
Sgms1Q8VCQ6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Sgms1Q8VCQ6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Sgms1Q8VCQ6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Sgms1Q8VCQ6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Sgms1Q8VCQ6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Sgms1Q8VCQ6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.48■■■□□ 2.95
Sgms1Q8VCQ6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Sgms1Q8VCQ6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Sgms1Q8VCQ6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Sgms1Q8VCQ6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.28■■■□□ 2.92
Sgms1Q8VCQ6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.22■■■□□ 2.91
Sgms1Q8VCQ6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Sgms1Q8VCQ6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
Sgms1Q8VCQ6 Gm23366-201ENSMUST00000175022 89 ntBASIC33.06■■■□□ 2.88
Sgms1Q8VCQ6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Sgms1Q8VCQ6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Sgms1Q8VCQ6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Sgms1Q8VCQ6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Sgms1Q8VCQ6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.88■■■□□ 2.85
Sgms1Q8VCQ6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Sgms1Q8VCQ6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Sgms1Q8VCQ6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Sgms1Q8VCQ6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Sgms1Q8VCQ6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Sgms1Q8VCQ6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Sgms1Q8VCQ6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Sgms1Q8VCQ6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.3■■■□□ 2.76
Sgms1Q8VCQ6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.26■■■□□ 2.75
Sgms1Q8VCQ6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Sgms1Q8VCQ6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.15■■■□□ 2.74
Sgms1Q8VCQ6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Sgms1Q8VCQ6 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.04■■■□□ 2.72
Sgms1Q8VCQ6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Sgms1Q8VCQ6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Sgms1Q8VCQ6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Sgms1Q8VCQ6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Sgms1Q8VCQ6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Sgms1Q8VCQ6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.6■■■□□ 2.65
Sgms1Q8VCQ6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Sgms1Q8VCQ6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.44■■■□□ 2.62
Sgms1Q8VCQ6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Sgms1Q8VCQ6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Sgms1Q8VCQ6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
Sgms1Q8VCQ6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.32■■■□□ 2.6
Sgms1Q8VCQ6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Sgms1Q8VCQ6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Sgms1Q8VCQ6 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.19■■■□□ 2.58
Sgms1Q8VCQ6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Sgms1Q8VCQ6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Sgms1Q8VCQ6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Sgms1Q8VCQ6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.17■■■□□ 2.58
Sgms1Q8VCQ6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Sgms1Q8VCQ6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.12■■■□□ 2.57
Sgms1Q8VCQ6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Sgms1Q8VCQ6 Gm25238-201ENSMUST00000174914 89 ntBASIC31.07■■■□□ 2.56
Sgms1Q8VCQ6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.02■■■□□ 2.56
Sgms1Q8VCQ6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Sgms1Q8VCQ6 Gm27325-201ENSMUST00000175467 74 ntBASIC30.98■■■□□ 2.55
Sgms1Q8VCQ6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.98■■■□□ 2.55
Sgms1Q8VCQ6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Sgms1Q8VCQ6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sgms1Q8VCQ6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
Sgms1Q8VCQ6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Sgms1Q8VCQ6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Sgms1Q8VCQ6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
Sgms1Q8VCQ6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Sgms1Q8VCQ6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Sgms1Q8VCQ6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Sgms1Q8VCQ6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Sgms1Q8VCQ6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.66■■■□□ 2.5
Sgms1Q8VCQ6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Sgms1Q8VCQ6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Sgms1Q8VCQ6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Sgms1Q8VCQ6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Sgms1Q8VCQ6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Sgms1Q8VCQ6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
Sgms1Q8VCQ6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Sgms1Q8VCQ6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Sgms1Q8VCQ6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Sgms1Q8VCQ6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Sgms1Q8VCQ6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.37■■■□□ 2.45
Sgms1Q8VCQ6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Sgms1Q8VCQ6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Sgms1Q8VCQ6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Sgms1Q8VCQ6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Sgms1Q8VCQ6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.23■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms