RNA–Protein interactions for RNA: YOR042W

CUE5, Transcript of Ubiquitin-binding protein, yeast

Gene CUE5, Length 1,236 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE5	YOR042W	ZRG17	P53735	605 aa		4.78	□□□□□ -1.64
CUE5	YOR042W	MUS81	Q04149	632 aa	Predicted RBP	4.78	□□□□□ -1.64
CUE5	YOR042W	HEL2	Q05580	639 aa	Known RBP	4.78	□□□□□ -1.64
CUE5	YOR042W	VPS68	Q12016	184 aa		4.78	□□□□□ -1.64
CUE5	YOR042W	PST1	Q12355	444 aa		4.78	□□□□□ -1.64
CUE5	YOR042W	AHA1	Q12449	350 aa	Known RBP	4.78	□□□□□ -1.64
CUE5	YOR042W	FUM1	P08417	488 aa	Known RBP	4.77	□□□□□ -1.65
CUE5	YOR042W	SPT15	P13393	240 aa	Known RBP	4.77	□□□□□ -1.65
CUE5	YOR042W	RSR1	P13856	272 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	MET8	P15807	274 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	EXO70	P19658	623 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	PRP4	P20053	465 aa	Known RBP	4.77	□□□□□ -1.65
CUE5	YOR042W	SOL2	P37262	315 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	CTP1	P38152	299 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	RFC3	P38629	340 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	RRP3	P38712	501 aa	Known RBP	4.77	□□□□□ -1.65
CUE5	YOR042W	UBA4	P38820	440 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	BZZ1	P38822	633 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	NPT1	P39683	429 aa	Known RBP	4.77	□□□□□ -1.65
CUE5	YOR042W	YEL073C	P39974	107 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	TIF34	P40217	347 aa	Known RBP	4.77	□□□□□ -1.65
CUE5	YOR042W	TMA22	P47089	198 aa	Predicted RBP	4.77	□□□□□ -1.65
CUE5	YOR042W	MTR3	P48240	250 aa	Predicted RBP	4.77	□□□□□ -1.65
CUE5	YOR042W	GTR2	P53290	341 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	ASI2	P53895	289 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	SLM2	P53955	656 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	YML131W	Q03102	365 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	GAS3	Q03655	524 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	FMN1	Q03778	218 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	YML053C	Q04978	212 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	BCH1	Q05029	724 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
CUE5	YOR042W	PLB3	Q08108	686 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	SRO7	Q12038	1033 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	LAS17	Q12446	633 aa		4.77	□□□□□ -1.65
CUE5	YOR042W	GUK1	P15454	187 aa	Known RBP	4.76	□□□□□ -1.65
CUE5	YOR042W	PRP16	P15938	1071 aa	Predicted RBP	4.76	□□□□□ -1.65
CUE5	YOR042W	CRM1	P30822	1084 aa	Known RBP	4.76	□□□□□ -1.65
CUE5	YOR042W	SPR1	P32603	445 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	TOA1	P32773	286 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	RPP1	P38786	293 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	PCF11	P39081	626 aa	Predicted RBP	4.76	□□□□□ -1.65
CUE5	YOR042W	EMP65	P40085	556 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	FKH2	P41813	862 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	PFA3	P42836	336 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	BNA2	P47125	453 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	PHO23	P50947	330 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	NOP19	P53317	196 aa	Predicted RBP	4.76	□□□□□ -1.65
CUE5	YOR042W	CUS2	P53830	285 aa	Predicted RBP	4.76	□□□□□ -1.65
CUE5	YOR042W	AAT1	Q01802	451 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	ECM9	Q02202	377 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	GRS2	Q06817	618 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	YDR056C	Q12025	205 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	RRP42	Q12277	265 aa	Predicted RBP	4.76	□□□□□ -1.65
CUE5	YOR042W	ATG34	Q12292	412 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	GPR1	Q12361	961 aa		4.76	□□□□□ -1.65
CUE5	YOR042W	SLH1	P53327	1967 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	POL2	P21951	2222 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	COX3	P00420	269 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	SPT3	P06844	337 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	COS2	P0CX12	379 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	COS3	P0CX13	379 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	CLB1	P24868	471 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	BUB2	P26448	306 aa	Predicted RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	DEP1	P31385	405 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	MVD1	P32377	396 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	COX13	P32799	129 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
CUE5	YOR042W	SDH3	P33421	198 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	RPS1A	P33442	255 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	SIP2	P34164	415 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	YHR127W	P38833	243 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	GIM4	P40005	111 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	YER034W	P40022	185 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	GCD10	P41814	478 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	COS4	P43542	379 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	YGR015C	P53208	328 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	YNL010W	P53981	241 aa	Known RBP	4.75	□□□□□ -1.65
CUE5	YOR042W	YMR102C	Q03177	834 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	FAR10	Q06001	478 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	ATG33	Q06485	197 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	YDL121C	Q07541	149 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	ESA1	Q08649	445 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	YLR049C	Q12110	428 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	Q0142	Q9ZZW4	58 aa		4.75	□□□□□ -1.65
CUE5	YOR042W	CAR1	P00812	333 aa	Known RBP	4.74	□□□□□ -1.65
CUE5	YOR042W	STE3	P06783	470 aa		4.74	□□□□□ -1.65
CUE5	YOR042W	SCL1	P21243	252 aa	Known RBP	4.74	□□□□□ -1.65
CUE5	YOR042W	ARG1	P22768	420 aa		4.74	□□□□□ -1.65
CUE5	YOR042W	RAD14	P28519	371 aa		4.74	□□□□□ -1.65
CUE5	YOR042W	TFB1	P32776	642 aa		4.74	□□□□□ -1.65
CUE5	YOR042W	MGM101	P32787	269 aa	Known RBP	4.74	□□□□□ -1.65
CUE5	YOR042W	PTC1	P35182	281 aa		4.74	□□□□□ -1.65
CUE5	YOR042W	DEF1	P35732	738 aa	Known RBP	4.74	□□□□□ -1.65
CUE5	YOR042W	RMA1	P36001	430 aa	Known RBP	4.74	□□□□□ -1.65
CUE5	YOR042W	MRPL37	P36532	105 aa		4.74	□□□□□ -1.65
CUE5	YOR042W	DED81	P38707	554 aa	Known RBP	4.74	□□□□□ -1.65
CUE5	YOR042W	INM1	P38710	295 aa		4.74	□□□□□ -1.65
CUE5	YOR042W	ARN1	P38731	627 aa		4.74	□□□□□ -1.65
CUE5	YOR042W	FRT2	P39734	528 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 115.6 ms